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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein

GI:116514501
NCBI info 116514501 Gene: - Synonym: LBUL_1476
SCL: @Secretory(released) (with CS) Length 73 COG -
Species: Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365 Location 1383558..1383779 Strand: -
Product: hypothetical protein
Sequence: 
MSKFGSFLLGAVFGAAAGVAAASLISDDKLKEVKDKIKSNPNVEDLKEKYDNGTEILKNQLASSQRTLKMILN


This pseudogene can be concatenated as : 116514501_116514500
Concatenated Sequence: 
MSKFGSFLLGAVFGAAAGVAAASLISDDKLKEVKDKIKSNPNVEDLKEKYDNGTEILKNQLASSQRTLKMILNxMKDFDDIVIDDSANGAGEQDASDLDN
AEKSEEGEEKPEEPSTPTSPDQE


Protein clustering result of GI: 116514501
protein GI: 116514501 is in cluster LaCOG02167
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG02167 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG02167
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842MsKFGSFLLGAVfGAAAGvaAaS-LISDDKLkeVKDKIKsNpnveDLKEKYDNGTEIlKN


116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365MsKFGSFLLGAVfGAAAGvaAaS-LISDDKLkeVKDKIKsNpnveDLKEKYDNGTEIlKN


42518585Lactobacillus_johnsonii_NCC_533MRKlGgFLLGsVvGlgvGlIAGSLLlpeettDDVKkKlaENEKLQDLKEKYDkGTEaIKN


116629105Lactobacillus_gasseri_ATCC_33323MRKlGgFLLGsVvGlgvGlIAGSLLlpeDatDDVKkKlaENEKLQDLKEKYDkGTEaIKN


58336766Lactobacillus_acidophilus_NCFMMKKltSFLLGAVaGcAAGFLAGSLLVSDeQVDDVKnKIKDNDKLQDLKkKYDNGTEIVKN


161507000Lactobacillus_helveticus_DPC_4571MKKFaSFvLGAVaGcAAGFIAGSLLVSDeQVDDVKnKIKDNDKLQDLKkKYDNGTEIVKN


 


104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842QLASFPKNIEDD-SELKDFDDIVIDDSang-aGEqDaSDlDnaEkseegEEkpEePSTpT


116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365QLASsqrtlkmilnxmKDFDDIVIDDSang-aGEqDaSDlDnaEkseegEEkpEePSTpT


42518585Lactobacillus_johnsonii_NCC_533QLASFPKsVEDD-SELKDFDDIVIDDtNKD-lGEDEkSDkeAVsDLNNAEkN--------


116629105Lactobacillus_gasseri_ATCC_33323QLASFPKsVEDD-SELrDFDDIVIDDtNKD-lGEDEkSDkDAVsDLNNAEDtEnn-----


58336766Lactobacillus_acidophilus_NCFMQLASFPKNVEDD-SELKDFDDIVIDDSNKD-dvaegnnaeeSVDDLNNAEkDDthsSSav


161507000Lactobacillus_helveticus_DPC_4571QLASFPKNVEDD-SELKDFDDIVIDDSNKDndvaDgdnaekSVDDLNNAEnDDtastpdn


 


104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842SPDQE


116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SPDQE


42518585Lactobacillus_johnsonii_NCC_533-----


116629105Lactobacillus_gasseri_ATCC_33323-----


58336766Lactobacillus_acidophilus_NCFMtPqd-


161507000Lactobacillus_helveticus_DPC_4571SsEE-






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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