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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02167
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster 7


Proteins in cluster LaCOG02167
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02167 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02167
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842MsKFGSFLLGAVfGAAAGvaAaS-LISDDKLkeVKDKIKsNpnveDLKEKYDNGTEIlKN
116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365MsKFGSFLLGAVfGAAAGvaAaS-LISDDKLkeVKDKIKsNpnveDLKEKYDNGTEIlKN
42518585Lactobacillus_johnsonii_NCC_533MRKlGgFLLGsVvGlgvGlIAGSLLlpeettDDVKkKlaENEKLQDLKEKYDkGTEaIKN
116629105Lactobacillus_gasseri_ATCC_33323MRKlGgFLLGsVvGlgvGlIAGSLLlpeDatDDVKkKlaENEKLQDLKEKYDkGTEaIKN
58336766Lactobacillus_acidophilus_NCFMMKKltSFLLGAVaGcAAGFLAGSLLVSDeQVDDVKnKIKDNDKLQDLKkKYDNGTEIVKN
161507000Lactobacillus_helveticus_DPC_4571MKKFaSFvLGAVaGcAAGFIAGSLLVSDeQVDDVKnKIKDNDKLQDLKkKYDNGTEIVKN
 
104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842QLASFPKNIEDD-SELKDFDDIVIDDSang-aGEqDaSDlDnaEkseegEEkpEePSTpT
116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365QLASsqrtlkmilnxmKDFDDIVIDDSang-aGEqDaSDlDnaEkseegEEkpEePSTpT
42518585Lactobacillus_johnsonii_NCC_533QLASFPKsVEDD-SELKDFDDIVIDDtNKD-lGEDEkSDkeAVsDLNNAEkN--------
116629105Lactobacillus_gasseri_ATCC_33323QLASFPKsVEDD-SELrDFDDIVIDDtNKD-lGEDEkSDkDAVsDLNNAEDtEnn-----
58336766Lactobacillus_acidophilus_NCFMQLASFPKNVEDD-SELKDFDDIVIDDSNKD-dvaegnnaeeSVDDLNNAEkDDthsSSav
161507000Lactobacillus_helveticus_DPC_4571QLASFPKNVEDD-SELKDFDDIVIDDSNKDndvaDgdnaekSVDDLNNAEnDDtastpdn
 
104774403Lactobacillus_delbrueckii_bulgaricus_ATCC11842SPDQE
116514501_116514500Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SPDQE
42518585Lactobacillus_johnsonii_NCC_533-----
116629105Lactobacillus_gasseri_ATCC_33323-----
58336766Lactobacillus_acidophilus_NCFMtPqd-
161507000Lactobacillus_helveticus_DPC_4571SsEE-
 
Copyright © 2010 Miaomiao Zhou
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