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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG99252
Product for cluster other product description for cluster
Functional class for cluster Subcellular location for cluster
Domains for cluster Size of cluster


Proteins in cluster LaCOG99252
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG99252 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG99252
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116495367Lactobacillus_casei_ATCC_334--------------------MVHSKHHGWLAIGLTAFALGTAGISLATSGQVVHASDQPA
191638881Lactobacillus_casei_BL23mramrrqlwsvltdkehkvtLVHSKHHGWLAIGLTAFALGTAGISLATSGQVVHASDQPS
 
116495367Lactobacillus_casei_ATCC_334TSQQSQtNNGRVWTLRPVSQIEAQIKASNStVYDIQWGDTLSTISEALNHTGFTTSVDRL
191638881Lactobacillus_casei_BL23TSQQSKaNNGRVWTLRPVSQIEAQIKASNSkVYDIQWGDTLSTISEALNHTGFTTSVDRL
 
116495367Lactobacillus_casei_ATCC_334AAINRIANVNLIYAGAKLSLQGSGDNATVTTQNAAGTNQTFNLNPAKPAISTPAQQAEVK
191638881Lactobacillus_casei_BL23AAINRIANVNLIYAGAKLSLQGSGDNATVTTQNAAGTNQTFNLNPAKPAIATPAQQAEVK
 
116495367Lactobacillus_casei_ATCC_334YTTIGGSGSGSGQQGITSGaGIDQiAKDnDAAIKAaAAAKAKAEAEKAAAEKAEVEAEAK
191638881Lactobacillus_casei_BL23YTTIGGSGSGSGQQGISSGtGIDQaAKDkDAAIKAdAAAKAKAEAEKAAAEKAKVEAEAK
 
116495367Lactobacillus_casei_ATCC_334LTALLNTENAQTLTDLQAKRTAAQAAaDAAKTKVDAaQAKLPAAQTAVAQAQAtFDtANA
191638881Lactobacillus_casei_BL23LTALLNTENAQTLTDLQAKRTAAQAAvDAAKTKVDAtQAKLPAAQTAVAQAQAaFDnANA
 
116495367Lactobacillus_casei_ATCC_334AVNAKQAAVDQASAQVKTLSAQMTDLQNQLNTLTEQTKDNPDSQATITTVKAQLAVAQGK
191638881Lactobacillus_casei_BL23AVNAKQAAVDQASAQVKTLSAQMTDLQNQLNTLTEQTKDNPDSQATITTVKAQLAVAQGK
 
116495367Lactobacillus_casei_ATCC_334LTSYEGQLADATAALAEAKQAANQAVQNLNTANQAlISVDNEAKAAQNDFvQAQTTLKAL
191638881Lactobacillus_casei_BL23LTSYEGQLADATAALAEAKQAANQAVQNLNTANQApISVDNEAKAAQNDFaQAQTTLKAL
 
116495367Lactobacillus_casei_ATCC_334PTSVASQNSQvAQAVKAQLADLNTKINQLDQKIKTLDTQIATWQDQLTTAQTNVEAAKAN
191638881Lactobacillus_casei_BL23PTSVASQNSQaAQAVKAQLADLNTKINQLDQKIKTLDTQIATWQDQLTTAQTNVEAAKAN
 
116495367Lactobacillus_casei_ATCC_334ITTAETQASKVDTTDHQQTLpAVQQTVADAEKTIPTIHVPQDTEKQVTINKDENGQVLiD
191638881Lactobacillus_casei_BL23ITTAETQASKVDTTDHQQTLtAVQQTVADAEKTIPTIHVPQDTEKQVTINKDENGQVLtD
 
116495367Lactobacillus_casei_ATCC_334LTGYKLLTAGTPVKTVETLANGDTITTYTTTNIYHKIAHQVVNKTVNVDEAGNILTSTDG
191638881Lactobacillus_casei_BL23LTGYKLLTAGTPVKTVETLANGDTITTYTTTNIYHKIAHQVVNKTVNVDEAGNILTSTDG
 
116495367Lactobacillus_casei_ATCC_334YTKVSSSDKSVDTTDPKTGDITTTVTTTVVWKKTETPTHVTVNKTVNVDEAGNVLTSTDg
191638881Lactobacillus_casei_BL23YTKVSSSDKSVDTTDPKTGDITTTVTTTVVWKKTETPTHVTVNKTLNVDEAGNVLTSTD-
 
116495367Lactobacillus_casei_ATCC_334ytqvssskksvdttdpttgnitttitttvvwkktetpthvtvnktvnvdesgnvltstdG
191638881Lactobacillus_casei_BL23-----------------------------------------------------------G
 
116495367Lactobacillus_casei_ATCC_334YTQVSSSKKSVDTTDPTTGNITTTITTTVVWKKTETPTHVTVNKTVNVDESGNVLTSTDG
191638881Lactobacillus_casei_BL23YTQVSSSKKSVDTTDPTTGNITTTITTTVVWKKTETPTHVTVNKTVNVDESGNVLTSTDG
 
116495367Lactobacillus_casei_ATCC_334YTQVSSSKKSVDTTDPTTGNITTTITTTVVWKKNETPAPTHTYDLKTVNEDKSGHVLTNT
191638881Lactobacillus_casei_BL23YTQVSSSKKSVDTTDPTTGNITTTITTTVVWKKNETPAPTHTYDLKTVNEDKSGHVLTNT
 
116495367Lactobacillus_casei_ATCC_334DGYSIVSSSKESVDATDPKTGNITTTVTTTVVWEKTPQRLIKNQTVNLDESGKVLTNTNG
191638881Lactobacillus_casei_BL23DGYSIVSSSKESVDATDPKTGNITTTVTTTVVWEKTPQRLIKNQTVNLDESGKVLTNTNG
 
116495367Lactobacillus_casei_ATCC_334YNQDSSSVKTTDVTDPVTGDVTTTFTTTIIWKKDTTGVTITNKTVNVDENDKVLTSTDGY
191638881Lactobacillus_casei_BL23YNQDSSSVKTTDVTDPVTGDVTTTFTTTIIWKKDTTGVTITNKTVNVDENDKVLTSTDGY
 
116495367Lactobacillus_casei_ATCC_334YFIGNTTVTNFGLDGNGNVVSKVVTTTNKYYKTQAKTVYKEVDVDEGGYTLTDKTGYVKV
191638881Lactobacillus_casei_BL23YFIGNTTVTNFGLDGNGNVVSKVVTTTNKYHKTQAKTVYKEVDVDEGGYTLTDKTGYVKV
 
116495367Lactobacillus_casei_ATCC_334SSTPTSTTAIEGYGDTVTTVTTTNIWRNVEAAGTIIGaIKSVNDATTKLIEKQIQTNDQK
191638881Lactobacillus_casei_BL23SSTPTSTTAIEGYGDTVTTVTTTNIWRNVEAAGTIIGdIKSVNDATTKLIEKQVQTNDQK
 
116495367Lactobacillus_casei_ATCC_334VSIEQAEAYTDADLTLAVAKKFNVLVNGEQARTGRTQTVLTSDPKAYKMEAPRAVEVMYK
191638881Lactobacillus_casei_BL23VSIEQAEAYTDADLTLAVAKKFNVLVNGEQARTGRTQTVLTSDPKAYKMEAPRAVEVMYK
 
116495367Lactobacillus_casei_ATCC_334FSHTRPVNPPATGSQNVTYQKGEVYMNRSTENISTSSLWKKDVDGSADKLSTLIANAMFQ
191638881Lactobacillus_casei_BL23FSHTRPVNPPATGSQNVTYQKGEVYMNRSTENISTSSLWKKDVDGSADKLSTLIANAMFQ
 
116495367Lactobacillus_casei_ATCC_334QYIVDERPENNHGVTGGHYENIINSGFKNIVIGVYVVDQGDYYAASTAVATGnDGTYNGN
191638881Lactobacillus_casei_BL23QYIVDERPENNHGVTGGHYENIINSGFKNIVIGVYVVDQGDYYAASTAVATGtDGTYNGN
 
Copyright © 2010 Miaomiao Zhou
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