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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG


LaCOG99210
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster secreted
Domains for cluster Size of cluster


Proteins in cluster LaCOG99210
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG99210 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG99210
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
58337697Lactobacillus_acidophilus_NCFMMnTRKLiTSMAAAVMLSTgLAGvGtaMTnqpaqAaTqsgSS---------ISIRRRSVTa
161507784Lactobacillus_helveticus_DPC_4571MkTKKLfTSIAAAVMLSTsLAGsGavLSqtahaAnTtqtTTknsndkkgtVSVKRRSVTv
 
58337697Lactobacillus_acidophilus_NCFMTVNSDKPqLIAydpstnKfVKaLdSTYvKGQTIpVYYAItaTSTAnGT-sQnvtfYFLEN
161507784Lactobacillus_helveticus_DPC_4571TINSDKPtLLAvg-edgKsVKpVaSTYtKGQTIqVYYSVafTATAqGSegQqfpaYYVEN
 
58337697Lactobacillus_acidophilus_NCFMRtVDGKscMIlIPStSVTpAStVPTaeefqktaendaktiQDAYaNRtIKsItVTPKSKK
161507784Lactobacillus_helveticus_DPC_4571KaIDGKesMIfIPAgAVTaATaVPS---------------QEAYqNRdLKyIvVTPKSKK
 
58337697Lactobacillus_acidophilus_NCFMGAKIYYAYKKSaKSKKIvFKATnKKIKyGKKYKSSMIVKNGKSRYVYIGKKRYLKSTAVK
161507784Lactobacillus_helveticus_DPC_4571GAKIYYAYKKTrKSKKVyFKATkKKIKkGKKYKSSMIVKHGKTRYVYIGKKRYVKSSALK
 
58337697Lactobacillus_acidophilus_NCFMvtnVKYsplnlpddiknlivnn
161507784Lactobacillus_helveticus_DPC_4571---IRW----------------
 
Copyright © 2010 Miaomiao Zhou
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