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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG99191
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster LPxTG Cell-wall anchored
Domains for cluster Size of cluster


Proteins in cluster LaCOG99191
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG99191 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG99191
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
104774731_104774729Lactobacillus_delbrueckii_bulgaricus_ATCC11842MKARSETRIKQMAvVAAAGIGAVSqrghxf--------ggkEgSvghcYgKSgRnSaRfe
116514862_116514860Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365MKARSETRIKQMAaVAAAGIGAVSlgaanlpqpvnaatndvQaSssqdYlKAaQeNvKta
 
104774731_104774729Lactobacillus_delbrueckii_bulgaricus_ATCC11842pgKgplgclgSNtAdGp---dpTtptEptQpStepsTDpTtepttEpSkepStEptaeey
116514862_116514860Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365eaEntqaqqaASqAqGavadqeSavnEaqKaNeaaqTDlSaaqdaQaAaakNaEankaaq
 
104774731_104774729Lactobacillus_delbrueckii_bulgaricus_ATCC11842teEpAD----tEedTdgGdvVtVvNtdEEpAT------------------------KSAA
116514862_116514860Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365aaDqANldqakEaqTkaGqaLxMqSasEEtSTakkanddavkaqngqdysrsradqQTAA
 
104774731_104774729Lactobacillus_delbrueckii_bulgaricus_ATCC11842ktptlvtKLANTAPVAKAPAATAAQLPQTGEKDAKPGILAGILSLLAGVSLFGFSFEKRK
116514862_116514860Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365andeakaKLANTAPVAKAPAATAAQLPQTGEKDAKPGILAGILSLLAGVSLFGFSFEKRK
 
104774731_104774729Lactobacillus_delbrueckii_bulgaricus_ATCC11842QEK
116514862_116514860Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365QEK
 
Copyright © 2010 Miaomiao Zhou
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