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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG99178
Product for cluster putative surface layer protein other product description for cluster hypothetical protein
Functional class for cluster cell-wall turnover Subcellular location for cluster secreted
Domains for cluster Size of cluster


Proteins in cluster LaCOG99178
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG99178 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG99178
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842--mLKkLrnSLFALtalLs----------------FtaLaAT-----------pNtVsTa
161506701Lactobacillus_helveticus_DPC_4571mnkIKlIatTVFSLlffIvsdgnvqaaqktihtnyYagIkSTalsynvngkslsSgIkTn
 
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842SSaKY--tPKyVKrQv------------------------vlQLncNSYVYDryGnRMpw
161506701Lactobacillus_helveticus_DPC_4571TTmKYygnPRlIKgQkyvcynvgkgkyvpldsigkvngrntfRLlnNSYIYNasGkKI--
 
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842fnglyGpLgYlkedsYvyttrnrIvRTNKDvRYFtLfTkyhAtkYnydfvgKKYWLPYKK
161506701Lactobacillus_helveticus_DPC_4571-----GsLsY----rYpvyfsgsLrKTSQDkRYYvLeSnidSqaYtts--tEKYYLPYKK
 
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842InghYFYyIGyGaYIkaRNVfSVNGLlqySNgEKamLTmsG------YpftfdSktK---
161506701Lactobacillus_helveticus_DPC_4571IknsYYYsLGkGrYInvRNVaTINGLqncSNsEKitVTapGrqtvpvYvvndsSdaKtgk
 
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842------KIkdMtkNtpIVksn---------------------------------------
161506701Lactobacillus_helveticus_DPC_4571vlpgvvKVngVnaHrvIVdgktvnvgagdmilgqripsgttvtvnaktagpqykyqikgt
 
104774779Lactobacillus_delbrueckii_bulgaricus_ATCC11842-------------------------------
161506701Lactobacillus_helveticus_DPC_4571htfisasnikgsttkisnllpyyvdldklnn
 
Copyright © 2010 Miaomiao Zhou
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