LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

LACOG

LaCOG99100
Product for cluster	surface layer protein	other product description for cluster
Functional class for cluster	cell-wall turnover	Subcellular location for cluster	secreted
Domains for cluster		Size of cluster

Proteins in cluster LaCOG99100
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color legend:

Corrected sequence

Pseudo gene

Domain structure of LaCOG99100 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment for LaCOG99100
Color legend:		Corrected sequence		Pseudo gene		Gene made from mutiple pseudogenes


161506776	Lactobacillus_helveticus_DPC_4571	MKKNLRIVSAAAAALLAVAPiAAtAVSTVSAATTvNId-GntsTPvaqNtDVNLAtnftA
58336516	Lactobacillus_acidophilus_NCFM	MKKNLRIVSAAAAALLAVAPVAASAVSTVSAATTiNasssainTntnakyDVDVtpSVSA
58336520	Lactobacillus_acidophilus_NCFM	MKKNLRIVSAAAAALLAVAPVAASAVSTVnAAavnaIavGgsaTPlpnNsDVqISsSVAg

161506776	Lactobacillus_helveticus_DPC_4571	iAyvagqNGTqgTNGvVSGSvtAtYNGqSYTgNLtgNikdtTIyrAsdkKhvevsskdfA
58336516	Lactobacillus_acidophilus_NCFM	VAant-aNnTpaiaGnLtGtISASYNGktYTANLkADtenaTItaAGsT--tavKpaeLA
58336520	Lactobacillus_acidophilus_NCFM	Vtt---kNGssyTNGrISGSINASYNGtSYsANfsSsnagvvvstpGhTElsgeQingLe

161506776	Lactobacillus_helveticus_DPC_4571	AGqyYaV-IKD-VSFNFGSqNAdKkLTvSlkg------GLltt------TdkDakpaEsV
58336516	Lactobacillus_acidophilus_NCFM	AGvaYTVTVnD-VSFNFGSeNAgKTVTLgsansNVkftGtnsdNQ----TETNVs---TL
58336520	Lactobacillus_acidophilus_NCFM	pGsavTVTLRDgVSFNFGStNAnKTITLAfpk-NVsaaGLadaNKvsatsETsVdagKTI

161506776	Lactobacillus_helveticus_DPC_4571	tVtLDKNGVAnFaEVQtpNfKAVNpfstStVawY--QNnnvVTsanVtVnAGNNnlVNVs
58336516	Lactobacillus_acidophilus_NCFM	kVKLDqNGVASltnVsIaNVyAiNTtDnSnVnFYDVtSGaTVTNGaVSVnAdNqgqVNVa
58336520	Lactobacillus_acidophilus_NCFM	qVKtDKNGVvSFgsaQVlNVKvVeTsDvraVsFYDIQtGkTVeNGtlSivAGsNaraNVq

161506776	Lactobacillus_helveticus_DPC_4571	QIVaAlNg-YtAheLtrgdNgQvgSNpvtspiTAaAVtdqLKaQNIaVDgaGYFTAPtSL
58336516	Lactobacillus_acidophilus_NCFM	nvVaAiNSKYfAaQy---adkKlNtr---TanTedAikaaLKdQkIDVnSvGYFkAPhtf
58336520	Lactobacillus_acidophilus_NCFM	EIVnAFNAKYqAsQL---nNansNANvrlTdnnAqAVatmLraQNIDVDAqGYFTAPaSL

161506776	Lactobacillus_helveticus_DPC_4571	SLkFtATaNnsNaSAeLPVTVSiPNgKv---tTVeSVSKtIMHNAYYYDKnAKRVGTDkl
58336516	Lactobacillus_acidophilus_NCFM	tvnvkATSNtNgkSAtLPVvVtVPNvaE---pTVaSVSKRIMHNAYYYDKDAKRVGTDSV
58336520	Lactobacillus_acidophilus_NCFM	SLtFhAeStqNNetAqLPVTVSVtNgKEvtpsTVdSVSKRIMHNAYYYDKDAKRVGTDSV

161506776	Lactobacillus_helveticus_DPC_4571	tRYNSVtVsPkTTTINGKAYYeVVENGKAtgKYINAdNIDGTKRTLKHNAYVYkSSKKRA
58336516	Lactobacillus_acidophilus_NCFM	KRYNSVSVlPNTTTINGKtYYQVVENGKAVDKYINAaNIDGTKRTLKHNAYVYASSKKRA
58336520	Lactobacillus_acidophilus_NCFM	KRYNSVSVlPNTTTINGKAYYQVVENGKAVDKYINAaNIDGTKRTLKHNAYVYASSKKRA

161506776	Lactobacillus_helveticus_DPC_4571	NKVVLKKGteVTTYGnpYTFKNGkKYYKIGadTkKTYVrVeNFd
58336516	Lactobacillus_acidophilus_NCFM	NKVVLKKGEvVTTYGaSYTFKNGQKYYKIGDNTDKTYVKVANFR
58336520	Lactobacillus_acidophilus_NCFM	NKVVLKKGEvVTTYGaSYTFKNGQKYYKIGDNTDKTYVKVANFR