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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG99078
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster


Proteins in cluster LaCOG99078
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG99078 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG99078
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116495811Lactobacillus_casei_ATCC_334MLKKWVWVTVLSVIGIVALGFGgWALIDHYQYSQLVDQPSDVKKWEADPRPLQSKSAAIK
191639296Lactobacillus_casei_BL23MLKKWVWVTVLSVIGIVALGFGaWALIDHYQYSQLVDQPSDVKKWEADPRPLQSKSAAIK
 
116495811Lactobacillus_casei_ATCC_334QIKAIGQSDPLEKRAATDAKLVVIPGLRGAWSINAKTKKtGFGNNWVPQGVTQSKDAIYM
191639296Lactobacillus_casei_BL23QIKAIGQSDPLEKRAATDAKLVVIPGLRGAWSINAKTKKaGFGNNWVPQGVTQSKDAIYM
 
116495811Lactobacillus_casei_ATCC_334SLYDGNHKLNSIIVQVNKHNAKYNKTLILRSKSHVGGITYDIDHQRLLWSDDAAQTTGAG
191639296Lactobacillus_casei_BL23SLYDGNHKLNSIIVQVNKHNAKYNKTLILRSKSHVGGITYDIDHQRLLWSDDAAQTTGAG
 
116495811Lactobacillus_casei_ATCC_334ISYVSQREIDAYSAKATQQPIKSTRIELHLARRTSAIALYNNQLVFVKYGQNKKNRSILA
191639296Lactobacillus_casei_BL23ISYVSQREIDAYSAKATQQPIKSTRIELHLARRTSAIALYNNQLVFVKYGQNKKNRSILA
 
116495811Lactobacillus_casei_ATCC_334LPLNANGLPAPITMKQMKAWALELAPKFAGKTLDQEVNMVFKSLIQKKVINSYNNGWDRL
191639296Lactobacillus_casei_BL23LPLNANGLPAPITMKQMKAWALELAPKFAGKTLDQEVNMVFKSLIQKKVINSYNNGWDRL
 
116495811Lactobacillus_casei_ATCC_334QGIAIAKSGLTLLSQSNGSAPGKIWIRVPGNKSWTKLDFTAPKSGSKIINVPNSVEEISL
191639296Lactobacillus_casei_BL23QGIAIAKSGLTLLSQSNGSAPGKIWIRVPGNKSWTKLDFTAPKSGSKIINVPNSVEEISL
 
116495811Lactobacillus_casei_ATCC_334DPSEKHISMIFESGAKAYREAGSFMHRPSYMDRVIILPVLVKKGQVQ
191639296Lactobacillus_casei_BL23DPSEKHISMIFESGAKAYREAGSFMHRPSYMDRVIILPVLVKKGQIQ
 
Copyright © 2010 Miaomiao Zhou
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