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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG

LaCOG90021
Product for cluster aminoamino acid ABC transporter, substrate binding protein other product description for cluster Glutamine ABC transporter, glutamine-binding protein
Functional class for cluster transport Subcellular location for cluster Lipid anchored
Domains for cluster Bacterial extracellular solute-binding proteins, family 3 Size of cluster 11


Proteins in cluster LaCOG90021
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG90021 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG90021
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


55821555Streptococcus_thermophilus_LMG_18311MKlTKKIFalLAlVfAL-----VAvTaCS----snsSSGkstakartieEIKKsGelRIA


55823483Streptococcus_thermophilus_CNRZ1066MKlTKKIFalLAlVfAL-----VAvTaCS----snsSSGkstakartieEIKKsGelRIA


116628268Streptococcus_thermophilus_LMD-9MKlTKKIFalLAlVfAL-----VAvTaCS----snsSSGkstakartieEIKKsGelRIA


116617275Leuconostoc_mesenteroides_ATCC_8293MnK-KskwtlLvaVtvvtVgagVnYrilS-------akadtnqsgrtVkEIKKsGeIkIA


58337338Lactobacillus_acidophilus_NCFMMKv-KnIFnwtisILAiLLVIisAYfGfaQkgLNSGtSaSRwSNqNGVSEIKrRGYlRvA


161507579Lactobacillus_helveticus_DPC_4571MKK-KnIFniimgIVALIVVVsaAYfGftQPNLNSGtaGSRwSNeNGVSEIKrRGYIRvA


104773439Lactobacillus_delbrueckii_bulgaricus_ATCC11842MKK-KnIFniimgIVALIVVVsaAYfGftQPNLNSGtaGSRwSNeNGVSEIKrRGYIRvA


116513425Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365MKK-KnIFniimgIVALIVVVsaAYfGftQPNLNSGtaGSRwSNeNGVSEIKrRGYIRvA


184155299Lactobacillus_fermentum_IFO_3956MKKiqKLivgLltVLsifsL--VsFaGlS--------SakadSNqssVSaIKKRGYIRIA


116326670Lactobacillus_casei_ATCC_334MK--KRLFtriiaVVsvfaaLllvlTGCg----NSkkSsSQsnNpssVqqIKKnGtIRIA


42519232Lactobacillus_johnsonii_NCC_533MKK-hKfikkLiaaVgiLsVgaVtlTaCS----NnsSSsSssnNpssVaaIKKRGtlkvA


 


55821555Streptococcus_thermophilus_LMG_18311VFaDkkPfGyVdnkGayqGYDigLgnRlAKDLGVKpKyVsVdAaNRaefLiSNKvDItLA


55823483Streptococcus_thermophilus_CNRZ1066VFaDkkPfGyVdnkGayqGYDieLgnRlAKDLGVKpKyVsVdAaNRaefLiSNKvDItLA


116628268Streptococcus_thermophilus_LMD-9VFaDkkPfGyVdnkGayqGYDieLgnRlAKDLGVKpKyVsVdAaNRaefLiSNKvDItLA


116617275Leuconostoc_mesenteroides_ATCC_8293VFGDLkPYGWVdKnGKRqGYDieLAKkVAKDLGVKVKyVQVNANaRVDaLNSgKvDlaLA


58337338Lactobacillus_acidophilus_NCFMVFGDLPPYGWVNsnGKRVGYDVyLAhRmtqDLGVKIrFVQVNANNRVDTLNSNKADIILA


161507579Lactobacillus_helveticus_DPC_4571VFGDLPPYGWVNdqGKRVGYDVyLARRIAKDLnVKIrFiQVNANNRVDTLNSNKADIVLA


104773439Lactobacillus_delbrueckii_bulgaricus_ATCC11842VFGDLPPYGWVNeqGKRVGYDVyLARRIAKDLnVKIrFiQVNANNRVDTLNSNKADIVLA


116513425Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365VFGDLPPYGWVNeqGKRVGYDVyLARRIAKDLnVKIrFiQVNANNRVDTLNSNKADIVLA


184155299Lactobacillus_fermentum_IFO_3956VFGDLqPYGWVNKDGKRVGYDVrLARqIAKDLGVKVKFVQVNANNRVDTLNSNKADlVLA


116326670Lactobacillus_casei_ATCC_334VFGDLPPYGWVNKDGKRVGYDVtLAhqVAKDLGVKVKFVQVNANNRVDaLNSNKvDlVLA


42519232Lactobacillus_johnsonii_NCC_533VFGDLPPYGWVNKDGKRVGYDVrLARelAKemGVKVKFVQVNANNRVDTLNaNKADIVLA


 


55821555Streptococcus_thermophilus_LMG_18311NFTVTdERKkqVDFAlPYMKVSiGVVSPKdKvIkdVKELeGKtLIVTKGTTAEtYFeKNy


55823483Streptococcus_thermophilus_CNRZ1066NFTVTdERKkqVDFAlPYMKVSiGVVSPKdKvIkdVKELeGKtLIVTKGTTAEtYFeKNy


116628268Streptococcus_thermophilus_LMD-9NFTVTdERKkqVDFAlPYMKVSiGVVSPKdKvIkdVKELeGKtLIVTKGTTAEtYFeKNy


116617275Leuconostoc_mesenteroides_ATCC_8293NFTVTPERKkViDFAKPYMKVSiGVaSkKsKlITkVdqLhGKKLIVnKGTTAEtYFtKNy


58337338Lactobacillus_acidophilus_NCFMNFTVTPERKDVVDFAKPYMKVSVGVISPKsaPITSanqLKnKKLIVTKGTTAENYFSq-Q


161507579Lactobacillus_helveticus_DPC_4571NFTVTPERKDVVDFAKPYMKVSVGVISPKNaPInSaQELKGKKLIVTKGTTAENYFAK-Q


104773439Lactobacillus_delbrueckii_bulgaricus_ATCC11842NFTVTPERKDVVDFAKPYMKVSVGVISPKNaPInSaQkLKGKKLIVTKGTTAENYFAK-Q


116513425Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365NFTVTPERKDVVDFAKPYMKVSVGVISPKNaPInSaQELKGKKLIVTKGTTAENYFAK-Q


184155299Lactobacillus_fermentum_IFO_3956NFTVTdERKqVVDFAKPYMKVSiGVVSlKsdPITkVsqLKnKsiIinKGTTAENYFvsNQ


116326670Lactobacillus_casei_ATCC_334NFTVTPERKqViDFAKPYMKVSVGVVSPKNKaITkasqLKGKnvIVTKGTTAENYFtskQ


42519232Lactobacillus_johnsonii_NCC_533NFTVTPERKqVVDFAKPYMKVSVGVVSPKsKPITNVnqLKGKKvIVTKGTTAENYFtskQ


 


55821555Streptococcus_thermophilus_LMG_18311PNI---KLqKyDqysdayqALldGRGdAfstDNtevlAWaleNkgYeVGItSLGdPdtIA


55823483Streptococcus_thermophilus_CNRZ1066PNI---KLqKyDqysdayqALldGRGdAfstDNtevlAWaleNkgYeVGItSLGdPdtIA


116628268Streptococcus_thermophilus_LMD-9PNI---KLqKyDqysdayqALldGRGdAfstDNtevlAWaleNkgYeVGItSLGdPdtIA


116617275Leuconostoc_mesenteroides_ATCC_8293tka---sLLKFDSKTQQFaALKdGRadAitDDNSYLFAWVKshPdYkVGIKkLGeqsYIs


58337338Lactobacillus_acidophilus_NCFMkNV---nLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKqNPKYTVGIKSiGPkQYIs


161507579Lactobacillus_helveticus_DPC_4571sgV---nLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKKNPKYvVGIKSiGPrQYvA


104773439Lactobacillus_delbrueckii_bulgaricus_ATCC11842sgV---nLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKKNPKYvVGIKSiGPrQYvA


116513425Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365sgV---nLLKFDSKTQQFNALKNGRGAALADDNSYLYAWVKKNPKYvVGIKSiGPrQYvA


184155299Lactobacillus_fermentum_IFO_3956sklgiksiLKFDtKTQQFNALKNkRanALADDNSYLYAWVKKNPKYTVGIKtLGPsQdIs


116326670Lactobacillus_casei_ATCC_334PDV---KLLKFDSKTQQFNALKNGRGvALADDNSYLYAWsKdNPsYTVGIKSiGPksYIA


42519232Lactobacillus_johnsonii_NCC_533PDV---dLLKFDSKTQQFNAmKNGRaAALADDNSYLYAWVKnNPKYTVGIKhLGPnsYIA


 


55821555Streptococcus_thermophilus_LMG_18311PAVqKGNKeLLdfiNKdIkKLgeEnFFhKDYeKtLhPtyGdaaKadDlVvegGQVK


55823483Streptococcus_thermophilus_CNRZ1066PAVqKGNKeLLdfiNKdIkKLgeEnFFhKDYeKtLhPtyGdaaKadDlVvegGQVK


116628268Streptococcus_thermophilus_LMD-9PAVqKGNKeLLdfiNKdIkKLgeEnFFhKDYeKtLhPtyGdaaKadDlVvegGQVK


116617275Leuconostoc_mesenteroides_ATCC_8293PgVqKGNKSLLKWTdKEInKLNKnqFFtKDYdKtLAPYFGKDVKsSDItinn----


58337338Lactobacillus_acidophilus_NCFMPAVKKGNrSLLKWTNKEITKLNKEsFFveDYNKELrPYFGKDIKPtDIILa-----


161507579Lactobacillus_helveticus_DPC_4571PAVKKGNrSLLKWTNhEITKLtKEGFFvqDYqKELAPYFGKDIKPtDIVLr-----


104773439Lactobacillus_delbrueckii_bulgaricus_ATCC11842PAVKKGNrSLLKWTNhEITKLtKEGFFvqDYqKELAPYFGKDIKPtDIVLr-----


116513425Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365PAVKKGNrSLLKWTNhEITKLtKEGFFvqDYqKELAPYFGKDIKPtDIVLr-----


184155299Lactobacillus_fermentum_IFO_3956PAVKKGNKSLLnWTNKEITKLNKdGFFktDfNKELkPYFGsEVKaSDIIitndk--


116326670Lactobacillus_casei_ATCC_334PAVKKGNKSLLnWTNKEInKLtKqsFFvKDYNtQLkPYFGKEVKPSDIVLpvk---


42519232Lactobacillus_johnsonii_NCC_533PAVKKGNKSLLdWTNKhInKLNKdGFFinDYNqELkPYFGdDVKPSDIIink----






 



 
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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