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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG90020
Product for cluster hypothetical protein other product description for cluster Competence protein ComGF
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster


Proteins in cluster LaCOG90020
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG90020 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG90020
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
104773771Lactobacillus_delbrueckii_bulgaricus_ATCC11842----MKSKQ-EGFLalEAVVALaIvCIALTamvtCLSglKKlEQEssqRAnQALAYRMLK
116513776Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365----MKSKQ-EGFLalEAVVALaIvCIALTamvtCLSglKKlEQEssqRAnQALAYRMLK
42518834Lactobacillus_johnsonii_NCC_533----MKNKrIkGFifwEAclgftIaClgvilLgLtLkqnRqtEkqiEkRvDkSyAeyifK
161507250Lactobacillus_helveticus_DPC_4571mgtngKmKkVkGFLifEsaIAIiIsvVAvScLyLtvAegqKngQEiElktDriyAYhvLK
 
104773771Lactobacillus_delbrueckii_bulgaricus_ATCC11842eCpvKRVkVrDHeYvlTGKGdLYDETQQKiCQK--
116513776Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365eCpvKRVkVrDHeYvlTGKGdLYDETQQKiCQK--
42518834Lactobacillus_johnsonii_NCC_533hsDkKtllVHDHvYhr-------------------
161507250Lactobacillus_helveticus_DPC_4571tsDldQItVHDHvYervGqhyLnDkTtnqkfkvkd
 
Copyright © 2010 Miaomiao Zhou
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