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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG

LaCOG90008
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG90008
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG90008 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG90008
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


90961814Lactobacillus_salivarius_UCC118MKKvIyl-GITmlsamvlVGCSNtsSapNTtshssnvKTevKsSstSKKekkitaKavde


42518265Lactobacillus_johnsonii_NCC_533MKKnIFVSGITLMTMLLAVGCSNNASQSNTNNEAKStKTSHKKSHKSKKHTTkKDKTdiD


116628859Lactobacillus_gasseri_ATCC_33323MKKnIFVSGITLMTMLLAVGCSNSAnQSsTNNEAKSsKTSHKKSHKaKKHTTkKDKTdvD


 


90961814Lactobacillus_salivarius_UCC118ssvvaesSSvdsNnnnSvStnSNvqtaTNQvaSANSsvAkeSsSvatgNnNvteNavAps


42518265Lactobacillus_johnsonii_NCC_533TDnsETTSSdKKtDKSSESSKSSnseKTsQnESAsSNsSNSnESekSNNSNgSSNSsASN


116628859Lactobacillus_gasseri_ATCC_33323TDdsETTnSdKKNDKSSESSsntngkKTNknEStNSN--NSSDStgSNNSNnASNSaASN


 


90961814Lactobacillus_salivarius_UCC118vaaeSsQKvqevNqqltpAqiaalaayymgnDanSltvhnmgNynavsGadGQllfAysa


42518265Lactobacillus_johnsonii_NCC_533tQnNSgQsaASaNSS-SDtMFNKMVSnTIKENGYS-SsYGPDNFTLIDGGNGQYsLAEKS


116628859Lactobacillus_gasseri_ATCC_33323nQtNgksQnASsaNNaSDAMFNKMVSdTIKEhGYS-SsYGPDNFTLIDGGNGQYsLAEKS


 


90961814Lactobacillus_salivarius_UCC118dGnnlkVGgfgdtpwdSVnanDvmqkaqqqGNkdsinqvannttfekgy


42518265Lactobacillus_johnsonii_NCC_533TGT--iVGHY------SVKNGDLYKQDviTGNDvKVK------------


116628859Lactobacillus_gasseri_ATCC_33323TGT--iVGHY------SVKNGeLYKQDilTGNDvKVK------------






 



 
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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