LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

LACOG

LaCOG90002
Product for cluster	penicillin-binding protein	other product description for cluster
Functional class for cluster	cell-wall turnover	Subcellular location for cluster	N-terminally anchored
Domains for cluster	NTF2-like N-terminal transpeptidase domain , Penicillin-binding Protein dimerisation domain , Penicillin binding protein transpeptidase domain , Flagellar basal body-associated protein FliL	Size of cluster	3

Proteins in cluster LaCOG90002
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color legend:

Corrected sequence

Pseudo gene

Domain structure of LaCOG90002 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment for LaCOG90002
Color legend:		Corrected sequence		Pseudo gene		Gene made from mutiple pseudogenes


29376969	Enterococcus_faecalis_V583	mersnrnkKsSkkplIlGVsAlvlIaAaGgGyYaysqwQaKqElaeakkTAtTflnvlsK
116493882	Lactobacillus_casei_ATCC_334	-------MKKSTlTIIgGVAAAIVIIAGGfGLYHW--YQGKTEADAVQATAQTYTQAFAK
191637146	Lactobacillus_casei_BL23	-------MKKSTlTIIgGVAAAIVIIAGGfGLYHW--YQGKTEADAVQATAQTYTQAFAK

29376969	Enterococcus_faecalis_V583	qefDKlpsvVqeasLkknG--YdtKsvvekyQAiysgiqAegvKasdVqvKKakdnqYtf
116493882	Lactobacillus_casei_ATCC_334	RQYDKAvKQVDTSHLTGPGWHYTAKTLAARNQAVFDRVGASDIKITNVKTKKYDSKTYEL
191637146	Lactobacillus_casei_BL23	RQYDKAvKQVDTSHLTGPGWHYTAKTLAARNQAVFDRVGASDIKITNVKTKKYDSKTYEL

29376969	Enterococcus_faecalis_V583	TyklsMsTplGemkdlsYqssIaKkGDtyqIaWkPsLiFPdMsGnDkisIqvdnAkRGeI
116493882	Lactobacillus_casei_ATCC_334	TFTANMNTKIGKLSaQHYEAPIVKvGDNWRIQWSPRLLFPSMDGKDTVQIDLiaATRGQI
191637146	Lactobacillus_casei_BL23	TFTANMNTKIGKLSaQHYEAPIVKvGDNWRIQWSPRLLFPSMDGKDTVQIDLiaATRGQI

29376969	Enterococcus_faecalis_V583	vDRNgsgLAiNkvfdevGvVPGKLGsGAekTANikafsdkfgVsVdeinqkLsQgWVqaD
116493882	Lactobacillus_casei_ATCC_334	YDRNNQfLAkNGdVTQAGLVPGKLGTGADRTANLEKIAavWDVKVTSLETlLKQSWVTDD
191637146	Lactobacillus_casei_BL23	YDRNNQlLAkNGdVTQAGLVPGKLGTGADRTANLEKIAaaWDVKVTSLETlLKQSWVTDD

29376969	Enterococcus_faecalis_V583	sFVPitvasepvtelpTGAAtkdteSRyYPLGEAAAQLIGYtGTiTAeDIeKnPeLsstg
116493882	Lactobacillus_casei_ATCC_334	TFVPVKIVTD--SPVMTGAAYQTIGSRTYPLGEAAAQLIGYVGTATADDIRKDPTLTANS
191637146	Lactobacillus_casei_BL23	TFVPVKIVTD--SPVMTGAAYQTIGSRTYPLGEAAAQLIGYVGTATADDIRKDPTLTANS

29376969	Enterococcus_faecalis_V583	vIGKTGLErafDKeLRGqDGGslvIlddkeNvkkaLqTKekkdGqtiKLTIDsgvQqqAf
116493882	Lactobacillus_casei_ATCC_334	KIGKTGLEQIYDKQLRGTDGGQIsI-QNGDNI-HPLlTKKAvNGKSLKLTIDANQQKTAY
191637146	Lactobacillus_casei_BL23	KIGKTGLEQIYDKQLRGTDGGQIsI-QNGDNI-HPLlTKKAvNGKSLKLTIDANQQKTAY

29376969	Enterococcus_faecalis_V583	aifdkrpGSaVitdPqkGdLLatvSSPSYDPNkmaNGISQkeYDaYnNNkdLPFtaRFAt
116493882	Lactobacillus_casei_ATCC_334	TqLaGKAGSVVTMNPTNGELLTLASSPSYDPNAFVNGISQTDYDKYaNNTSLPFLSRFAQ
191637146	Lactobacillus_casei_BL23	TqLaGKAGSVVTMNPTNGELLTLASSPSYDPNAFVNGISQTDYDKYaNNTSLPFLSRFAQ

29376969	Enterococcus_faecalis_V583	gYAPGSTFKtiTgAIgLdagTlkPDeeleInGLKWQKDkSWGgYfaTRvkeAspvNlrtA
116493882	Lactobacillus_casei_ATCC_334	RYAPGSTFKMLTAAIALQNKTITPDTTKSISGLKWQKDSSWGDYkVTRTvDAASENMTQA
191637146	Lactobacillus_casei_BL23	RYAPGSTFKMLTAAIALQNKTITPDTTKSISGLKWQKDSSWGDYkVTRTvDAASENMTQA

29376969	Enterococcus_faecalis_V583	LVNSDNIyFAQqtLrMGedkfraGLnkfiFgeelDLPiaMtpAQISNedKfnSEiLLADT
116493882	Lactobacillus_casei_ATCC_334	LVNSDNIWFAQvALKMGASAYlKGLaP-LFKTQADLPLTMKKAQISNSGKLaSETLLADT
191637146	Lactobacillus_casei_BL23	LVNSDNIWFAQvALKMGASAYlKGLaP-LFKTQADLPLTMKKAQISNSGKLaSETLLADT

29376969	Enterococcus_faecalis_V583	gYGQGQLLiSPIqQAtMYSvfqNnGTlvyPkLvldketKkkdnVisANAANTiaTdLlgs
116493882	Lactobacillus_casei_ATCC_334	AYGQGQLLLSPIEQAAMYSTIANGGTMQQPTLIQGTKGKRTSSVLQANAANTVKTaLTHv
191637146	Lactobacillus_casei_BL23	AYGQGQLLLSPIEQAAMYSTIANGGTMQQPTLIQGTKGKRTSSVLQANAANTVKTaLTHv

29376969	Enterococcus_faecalis_V583	VeDpsGyvyNmynpnfslAAKTGTAEiKdKQDTDGKENsFLltlDrsnNkfLTmimvEns
116493882	Lactobacillus_casei_ATCC_334	VSDQAGTAHNLaiDGHTIAAKTGTAELKQKQDTDGKENGFLVAMDADKNTYLTVALIEGT
191637146	Lactobacillus_casei_BL23	VSDQAGTAHNLaiDGHTIAAKTGTAELKQKQDTDGKENGFLVAMDADKNTYLTVALIEGT

29376969	Enterococcus_faecalis_V583	GengsaTdisKPlidyLeatik
116493882	Lactobacillus_casei_ATCC_334	GSDDvVTaM-KPYVasLY----
191637146	Lactobacillus_casei_BL23	GSDDvVTaM-KPYVasLY----