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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG


LaCOG03465
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted
Domains for cluster LysM domain Size of cluster 4


Proteins in cluster LaCOG03465
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03465 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03465
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116627567Streptococcus_thermophilus_LMD-9MK-KKnyVgkAvMlgaLlAPIglptVSVlADgfyqNqtsAhaADITNWIAsTPqQItNNl
116491848Pediococcus_pentosaceus_ATCC_25745Mn-KKRitgAAlaTALLfAPlaIqtsTamADSfytqqtnAERADITNWvANTtEdISNNi
148544809Lactobacillus_reuteri_F275_JGIMKLsKKqLAAtFMTAVLagsVmIgSV-VTteAdNaSGSPeEQADITNWIANTPEQISNNM
184154152Lactobacillus_reuteri_F275_KitasatoMKLsKKqLAAtFMTAVLagsVmIgSV-VTteAdNaSGSPeEQADITNWIANTPEQISNNM
 
116627567Streptococcus_thermophilus_LMD-9itQnINpqqLdGqKYvIQWGDTLwGISqATGISIeKLAYDNNIQNiDLIFAGDVLILkRD
116491848Pediococcus_pentosaceus_ATCC_25745SaQHIdTNNLhGnKYvIQWGDTLSGISdATGISmAKLAYDNNIQNiDLIyAGDtLvLNRD
148544809Lactobacillus_reuteri_F275_JGIAmQHINTNNLNGTrYIIQWGDTLSGISaATGISVAKLcYDNNIQNAnLIFAGDVLILNRe
184154152Lactobacillus_reuteri_F275_KitasatoAmQHINTNNLNGTrYIIQWGDTLSGISaATGISVAKLcYDNNIQNAnLIFAGDVLILNRe
 
116627567Streptococcus_thermophilus_LMD-9GdVPAGYhvtgNGhrcAhsKIvINNYy-gdnNrViInnstfvsddHSkNtmiyapDNSDH
116491848Pediococcus_pentosaceus_ATCC_25745GeVPsdwhyygdGvyVAKTKvTINNFvdNshNTVNInVsPiSheegSssS-----kskDd
148544809Lactobacillus_reuteri_F275_JGIGSVPAGYDpnvNpnvVAQTKITIN----NGptTVNIAVQPqSvvKNyDNS-----DNSDH
184154152Lactobacillus_reuteri_F275_KitasatoGSVPAGYDpnvNpnvVAQTKITIN----NGptTVNIAVQPqSvvKNyDNS-----DNSDH
 
116627567Streptococcus_thermophilus_LMD-9SiSfs-------------NnnNNNnDkdkdSkeskeSSsSSsesKDaSSsS---tSsssS
116491848Pediococcus_pentosaceus_ATCC_25745SneyisdldpdgkKgeAasdtdsssDskssSkNhhSdSKSdsdEmDeSdfSdavsnEVsS
148544809Lactobacillus_reuteri_F275_JGIStTIy--------KAGAVNSfNNNDnDNEQSASQsSStKSAKHQKhTSSvS---ASDIvS
184154152Lactobacillus_reuteri_F275_KitasatoStTIy--------KAGAVNSfNNNDnDNEQSASQsSStKSAKHQKhTSSvS---ASDIvS
 
116627567Streptococcus_thermophilus_LMD-9sassSaasgSeskastDtskekeLteDafqDkvqeevsNiYqqkRSgrpawkffShvDdk
116491848Pediococcus_pentosaceus_ATCC_25745kLglNdgklTvdftgkDddsdsdvntDDtsDdSDSDtedVYdnnQN------isTgsDkl
148544809Lactobacillus_reuteri_F275_JGIGLN-------------DaNNNDKLSfDEgDggSDADelNV--------------------
184154152Lactobacillus_reuteri_F275_KitasatoGLN-------------DaNNNDKLSfDEgDggSDADelNV--------------------
 
116627567Streptococcus_thermophilus_LMD-9nDlNADakeDtertaLyrqGETakdE--DiAngpKDgaRteanakALaeKIyDtlnnggK
116491848Pediococcus_pentosaceus_ATCC_25745tDeNAEklaDkivaqLkadGKTkdiDkaDnvelmieAnddDFsfnvtLTttDDsdsdeds
148544809Lactobacillus_reuteri_F275_JGI----------------------------DsAailKDAkKNDYD--AILSEIEsAlGSkaK
184154152Lactobacillus_reuteri_F275_Kitasato----------------------------DsAailKDAkKNDYD--AILSEIEsAlGSkaK
 
116627567Streptococcus_thermophilus_LMD-9mselikAKyaqIkVtykGDkwtfnvdVykekeSSsSStetssEskAsSSdDSqtEtrmsS
116491848Pediococcus_pentosaceus_ATCC_25745-----nSdDsdadtDsEGaDsedtdTdSEDvDSSsdeSsdEDtDfdDeSeDadtdteDEd
148544809Lactobacillus_reuteri_F275_JGI-------KDTtVyIEkDGNEiHvyaSVNDDaDSSNSSSNkDDED-SDSSSsSESESSDDS
184154152Lactobacillus_reuteri_F275_Kitasato-------KDTtVyIEkDGNEiHvyaSVNDDaDSSNSSSNkDDED-SDSSSsSESESSDDS
 
116627567Streptococcus_thermophilus_LMD-9SsSSSssshtetdSeaN--sSDlTgDE
116491848Pediococcus_pentosaceus_ATCC_25745qnSSSEDEDSNnQvTTND-DenTdteE
148544809Lactobacillus_reuteri_F275_JGISQSSSDDEDSNSQATTsDHDTDTSdDE
184154152Lactobacillus_reuteri_F275_KitasatoSQSSSDDEDSNSQATTsDHDTDTSdDE
 
Copyright © 2010 Miaomiao Zhou
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