spacer
spacer

LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Logo
spacer
Menu
Home
Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
Show all LaCOGs
Search / Browse All
Domain Search
Blast your sequence
spacer
LACOG


LaCOG03406
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG03406
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03406 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03406
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116493675Lactobacillus_casei_ATCC_334-MKKhrfVIAlVgLsL------FAASStiAAdMTqANmDqHsvTYTI-------------
191636928Lactobacillus_casei_BL23-MKKhrfVIAlVgLsL------FAASStivAdMTqANmDqHsvTYTI-------------
116332950Lactobacillus_brevis_ATCC_367mMKKvamiaAAaAmvLPLgVgaiApTngsAtaLaatktaakKtTlTlVSSksmKkA-aFH
116334570Lactobacillus_brevis_ATCC_367-MKKtltVLtALALmaPLaI--vApvSaktttaTttqasvkKqTYTILSSsfyKtAktYH
 
116493675Lactobacillus_casei_ATCC_334------------------------------------------------------------
191636928Lactobacillus_casei_BL23------------------------------------------------------------
116332950Lactobacillus_brevis_ATCC_367vKsgsPaLYsAafaADKakVTMakKGsLtgqkTYyaTKKIvVKtkAaKTaKaknvtYvYV
116334570Lactobacillus_brevis_ATCC_367tKdakPvVYkAvmgADRptMTLtaKGkLkagtTYkvTKQVkVKinAkKSqK-----YsYV
 
116493675Lactobacillus_casei_ATCC_334-----KGDGLVIfDKtRT--------------------------------------YRtK
191636928Lactobacillus_casei_BL23-----KGDGLVIfDKtRT--------------------------------------YRtK
116332950Lactobacillus_brevis_ATCC_367ktsngKtkGwValsKLtkGiFKAAdGkKvTkkaadkvagktYTLVSaTSLKKSafhYKgn
116334570Lactobacillus_brevis_ATCC_367-----KGqGwVVssKLtaGkFKAAsGvKkT--------atkYTIVSvTALKKAktvhtkd
 
116493675Lactobacillus_casei_ATCC_334STaAaYKGTFAADAPTASFEKvGTLANhKDYrVTrKIKVKakMqGaAAQTFfYVNGHGWV
191636928Lactobacillus_casei_BL23STaAaYKGTFAADAPTASFEKvGTLANhKDYhVTrKIKVKakMqGaAAQTFfYVNGHGWV
116332950Lactobacillus_brevis_ATCC_367gSvAfftGkFAADkakvtltKkGTLAggKtYyaTKKItVKen-Kknvn--ylYVsskGWV
116334570Lactobacillus_brevis_ATCC_367ArpvvYKaavAADrPTmtlttnGkLkaattYkVTKqaKlKnaaKktvA--FsYVsGHGWV
 
116493675Lactobacillus_casei_ATCC_334kgSDLTrE------
191636928Lactobacillus_casei_BL23kgSDLTrE------
116332950Lactobacillus_brevis_ATCC_367vaSqLTagKFVpAD
116334570Lactobacillus_brevis_ATCC_367lqrDLTngQFMnAD
 
Copyright © 2010 Miaomiao Zhou
spacer