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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG03350
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG03350
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03350 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03350
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116490374Oenococcus_oeni_PSU-1MKNkkshfKLtkIiaLlipVFILTtifSfrNPl---------------------TDRyNP
42518516Lactobacillus_johnsonii_NCC_533MKk----fKIgvIsfLtVlViaLigvltVHtsa---------------------TDRLNP
58338126Lactobacillus_acidophilus_NCFMMKN----kKValvgaLsVlVvIiTlFvSVNSPminrvspyiaeaatcvkkhdaivDRLNP
 
116490374Oenococcus_oeni_PSU-1FlnseqSYAKVkKgTQKYrNVTayt-eqGrklSYtl-DFGGYDPDEQYvKItHKGkYVKr
42518516Lactobacillus_johnsonii_NCC_533lVSETvSYAKVPKsTQnYkqVTIInPKdsKtRaYKIKqvGGYDPNQEYIKIhHKGQYVKs
58338126Lactobacillus_acidophilus_NCFMFVSETvSYAqVPekTQQYvNVeIIdPKsGKnRSYKIKEitGYDPsrkYIKIdHKGQYVKt
 
116490374Oenococcus_oeni_PSU-1viYVqaKnapRkvR
42518516Lactobacillus_johnsonii_NCC_533IsYitkKQFynqq-
58338126Lactobacillus_acidophilus_NCFMIdYVsesKFlKikK
 
Copyright © 2010 Miaomiao Zhou
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