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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG03292
Product for cluster glycerophosphoryl diester phosphodiesterase other product description for cluster
Functional class for cluster enzyme Subcellular location for cluster N-terminally anchored
Domains for cluster Glycerophosphoryl diester phosphodiesterase family Size of cluster 2


Proteins in cluster LaCOG03292
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03292 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03292
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
42518881Lactobacillus_johnsonii_NCC_533mriMnKyIlVgFFILIFPFTCGFLNIAHRGDNEQGKFAEHSWIAYDRAVCAKVDYLELDL
116629856Lactobacillus_gasseri_ATCC_33323---MkKiIfViFFILVFPFTCGFLNIAHRGDNEQGKFAEHSWIAYDRALCAQVDYLELDL
 
42518881Lactobacillus_johnsonii_NCC_533QQTaDHVLVVSHDENLSRVFGIDKSIANlpYhDLITYKNQNdESIHrLvDVFKRYQSSNV
116629856Lactobacillus_gasseri_ATCC_33323QKTtDNVLVVSHDDNLSRVFGIDKTIANhsYqELLSYKNQNgESLHsLeDVFKRYQNSNV
 
42518881Lactobacillus_johnsonii_NCC_533KFMIEPKDNSDnDInnLLSLIKKYHLQNRVLLESFSElALLKIhKsDPQIPlTQLAGDfk
116629856Lactobacillus_gasseri_ATCC_33323KFMIEPKDDSEeDIklLLNLIRQYHLENRVLLESFSKsALMKIsKiNPQIPtTQLAGEvn
 
42518881Lactobacillus_johnsonii_NCC_533IsPmlQYYANNFYAkKaADYLgEHNKKYLLWGIDtETQMKKYsRPeENVSGILTDYPVKL
116629856Lactobacillus_gasseri_ATCC_33323LpPstQYYANNFYStKvANYLsEHNKRYLLWGVNkKTQMKQYlQPgENVSGLLTDYPVEL
 
42518881Lactobacillus_johnsonii_NCC_533AtILHENNVFKRyYEAaAYPSEsISGyMYLKNGkkVyVDQVKMKDNQLFYHVKPNIWISy
116629856Lactobacillus_gasseri_ATCC_33323AkLLHKSDIFKRnYEAiSFPSKlISGlMYLKNGssVnVDQVKIKNNQLFYHVKPNIWLSd
 
42518881Lactobacillus_johnsonii_NCC_533dNLKNSNkFAPKAQvGKIKLehDvqVYTDPaFEKkteKKLrKDSaWNYFAVKKMpGKTAY
116629856Lactobacillus_gasseri_ATCC_33323hDLKNSDhFAPKAQtGKIKLrkEamVYTDPfFKKyagKKLpKEStWNYFAVKKVdGKTAY
 
42518881Lactobacillus_johnsonii_NCC_533NLGGAQWVsQ
116629856Lactobacillus_gasseri_ATCC_33323NLGGSQWVkQ
 
Copyright © 2010 Miaomiao Zhou
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