spacer
spacer

LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Logo
spacer
Menu
Home
Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
Show all LaCOGs
Search / Browse All
Domain Search
Blast your sequence
spacer
LACOG


LaCOG03267
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted, LPxTG Cell-wall anchored
Domains for cluster Rib/alpha-like repeat Size of cluster 2


Proteins in cluster LaCOG03267
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03267 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03267
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
42518989Lactobacillus_johnsonii_NCC_533MMRKVkKRSIITsLGAAAMLASLSVgGTAFAASTtstDSStAttDQAKTYQTQLEEHKNL
116629521Lactobacillus_gasseri_ATCC_33323MMRQInKRNIMTgLGAAALLASLSLnGTAFAATT---DSAnAgaEQAKTYQTQLEQHKNL
 
42518989Lactobacillus_johnsonii_NCC_533QAYTNPLTVQaLTTTKGVLPDATSGISNWSqVPAGTVAaWDnkPEVNKaGTSYGTVYVTF
116629521Lactobacillus_gasseri_ATCC_33323QAYTNPLSVKtLTTTKGVLPDATSGISNWNtVPAGTVAnWDqtPEINKvGTSYGTVYVTF
 
42518989Lactobacillus_johnsonii_NCC_533PDGSRSRLAVYVTVKDgAAsqSseNtNttsSdkSSSAagTSkSTaKSSqIEgEaktsakd
116629521Lactobacillus_gasseri_ATCC_33323PDGSRSRLAVYVTVKDtAAqdSktNkSnvkSs-SSTSisSSdASkQSSsLKeD-------
 
42518989Lactobacillus_johnsonii_NCC_533adnhMEKSTtvekTDKdqaakSssKANEDVVVKDLGSTTVTEKNVSVVSNSKDk----dK
116629521Lactobacillus_gasseri_ATCC_33323----VEKSTakvnTNKs----SdeKANKDVVVKDLGSTTVTEKNVSVVNNSKDnkknskK
 
42518989Lactobacillus_johnsonii_NCC_533SSNPISVATRLPETvaKAtNPfVIIcGaLIAAVSgavIWsKKLKkRn
116629521Lactobacillus_gasseri_ATCC_33323TSNPVSVATQLPETegKAvNPlVVIgGlLVAAISavaIFgKKIKnRl
 
Copyright © 2010 Miaomiao Zhou
spacer