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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG03180
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG03180
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03180 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03180
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
999990015_116490656Oenococcus_oeni_PSU-1mgsgyfytkkvrrLvKaLIVlAcFaAfSflIpstvgkadhxmarglarsvGqtaaTfNpP
170016749Leuconostoc_citreum_KM20-----------mMLKKILltsAtiTScgLgI------------------fGTpthanqeh
116618831Leuconostoc_mesenteroides_ATCC_8293---------mdyMmKrIiIIsAllTglSLvv------------------lGTqleTeNqP
 
999990015_116490656Oenococcus_oeni_PSU-1AstAKSkKDKtstgntlqqldyVkStVQntTpleNnVsyaAtsSsQqTlSsvqTssqSss
170016749Leuconostoc_citreum_KM20vtytKpdREKVN-------VigiddAVKSlsDV-NsIQlsAskShQpertQqlTaEASvK
116618831Leuconostoc_mesenteroides_ATCC_8293Ae-AaSmnqtVN-------VkaVsSAisSfTDV-kltKveAipkkvvTsSEknevKAnsQ
 
999990015_116490656Oenococcus_oeni_PSU-1sSisEssyssstaTgTsmyseSqntVqrssVSssysyaakIsssSSipqtsVssssSsss
170016749Leuconostoc_citreum_KM20qneAkaEpApavQTqTlnhi----dmNEqqVAvEpktndQLsvpSSqSa-NVvaTaAPkp
116618831Leuconostoc_mesenteroides_ATCC_8293pSeAQeKaAdiaQvtsvssatTtaeVSKtaVtvnetqptQVvaeSnqStqNttvTetPva
 
999990015_116490656Oenococcus_oeni_PSU-1ISSgSdDInWLIsRESsGNpNAvNGsYkGIGQLSEaaYetYl-GmtwdqvkGNYqlQLkA
170016749Leuconostoc_citreum_KM20VTN-tgDIQWLItREShGdahAtNGAYYGIGQLaEsYYdkYVPGqnY---rGNYdVQLEA
116618831Leuconostoc_mesenteroides_ATCC_8293----SsDIQWLIqhESgGNvNAqNGAYYGIGQLSEnYYaqYVPGkdY---HGNYaVQLEA
 
999990015_116490656Oenococcus_oeni_PSU-1MQaYISARYasVsaAISfWQqNgWY
170016749Leuconostoc_citreum_KM20MQKYIaeRYGTVdNAISHWQsNNWY
116618831Leuconostoc_mesenteroides_ATCC_8293MQKYISARYGTVaNAIaHWQvNNWY
 
Copyright © 2010 Miaomiao Zhou
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