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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG03134
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster Size of cluster 2


Proteins in cluster LaCOG03134
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03134 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03134
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
42518248Lactobacillus_johnsonii_NCC_533MKKKFSFLILLGVILVSLTTACSnKsSKqakStgPSASSLINAKFNSSfANGHFTQTtNS
116628843Lactobacillus_gasseri_ATCC_33323MKKKFNFLLLLGVILVSLTTACSkKdSKpktNpePSASSLINAKFNSSlANGHFTQTiNS
 
42518248Lactobacillus_johnsonii_NCC_533NEMNQKSKSEGLFKDKGDVTNLTYTLTQKKKSQTEQMWLTKKDMYLLLEQNKGHWIKNSi
116628843Lactobacillus_gasseri_ATCC_33323DEMSQKSKSEGLFKDKGDVTNLTYTLTQKKKSQTEQMWLTKKDMYLLLEQNKGHWIKNSa
 
42518248Lactobacillus_johnsonii_NCC_533DADSFDsDQVKERFDPATFnKINKSLAQKATVQRKNGNYEISFDGTDANLWNAVNPLIID
116628843Lactobacillus_gasseri_ATCC_33323NANTFDpDQVKERFNPATFkKINKALAKKATVQKKNGNYDISFNGTDSNLWNAVNPLVID
 
42518248Lactobacillus_johnsonii_NCC_533AMNTPGSQNMQVARLVKSAQVQNLKITYLIDPTTKNVESMTFKAQYtAGGKYNFTWnLTY
116628843Lactobacillus_gasseri_ATCC_33323AMNTPGSQNMQVARLVKSAQVQNLKVTYLIDPTTKNVESMTFKAQYiAGGKYNFTWtLTY
 
42518248Lactobacillus_johnsonii_NCC_533DQLGQHSDLAVPSDIQKNAIsAEDIKKAQeEQNnQ
116628843Lactobacillus_gasseri_ATCC_33323DQLGQHADLAVPADIQKNAIdAEEIKKAQaEQNkQ
 
Copyright © 2010 Miaomiao Zhou
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