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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG

LaCOG03025
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted, LPxTG Cell-wall anchored
Domains for cluster Gram positive anchor Size of cluster 2


Proteins in cluster LaCOG03025
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG03025 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG03025
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


116333312Lactobacillus_brevis_ATCC_367mkwhrIvRhLavIlTgMVWgSqslsaQAaEpyeLeimykVEArdE-lGVkasrvFatvkq


116512231Lactococcus_lactis_cremoris_SK11-----MkKsIvaLsTcILFtTlpsptKAdQldnLspdtsVQAeqEwyGIstiefFnmgld


 


116333312Lactobacillus_brevis_ATCC_367----QVipGEpfpGhpqlsql--kpLyippaadrpgsSarIIryVaMayNvakvhlrfVd


116512231Lactococcus_lactis_cremoris_SK11sgiiEVtqGDiiiGtatfgyyggtsLtaddivvssnlNyvVIsnItIdnNshtgtfdiMv


 


116333312Lactobacillus_brevis_ATCC_367EqktVvSqrESkaplqigglvyitaptgYQLaaSqvaerfalLPEDtwtIgvqkVTg---


116512231Lactococcus_lactis_cremoris_SK11DtsnIsSgsET-----------------FQLniTda------LPENdrhVtpysITnmiq


 


116333312Lactobacillus_brevis_ATCC_367-aEtPsggdkPTP-PkPaPEPaPePvtpdiPkPqPTPEP-------PTPDiPkPqPsPlP


116512231Lactococcus_lactis_cremoris_SK11inEaPepdpdPTPdPdPtPDPdPtPdpdptPdPdPTPDPdptldpdPTPD-PdPtPdPdP


 


116333312Lactobacillus_brevis_ATCC_367mPqPtPTPmPQPilDqttvgatgdKPTkqPtPvrPSasvghqaprdwwqsipttqaakqv


116512231Lactococcus_lactis_cremoris_SK11tPdPdPTPdPEPtpDp--------EPTpdPePtsPS------------------------


 


116333312Lactobacillus_brevis_ATCC_367LrspSMtkPKEfrdnhrrvrntqtsrLrtvRAsVPSsdtatakaTtlHatrrLPQTnEra


116512231Lactococcus_lactis_cremoris_SK11InqnTVniPKD--------------sVtlnKAiIPN--------TveNnintLPETgDng


 


116333312Lactobacillus_brevis_ATCC_367saaswWgfAGI--ggclgyVVYrRIRfys


116512231Lactococcus_lactis_cremoris_SK11ktnisFilAGIimisssaiLLY-KIR---






 



 
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
		Copyright © 2010 Miaomiao Zhou
		 
		 
	
 
	
 
			 
	 
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