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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02936
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted
Domains for cluster Size of cluster 2


Proteins in cluster LaCOG02936
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02936 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02936
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28379493Lactobacillus_plantarum_WCFS1MKKlMIAVTGLamVATLGAaVPvTgITanaAtkKTTatknVAPSLKVNAIYnnTTQItGT
116332775Lactobacillus_brevis_ATCC_367MKKfMVALTGLvtLATVGAtVPaTaVTtahAatKST---yVSPSLKVNAIYttSTKVaGT
 
28379493Lactobacillus_plantarum_WCFS1ATKGAKITVKSTaNAKkNLgTaTASKTTGKYTVKLAKtLKaqSNVYVYATNptTKAYFYR
116332775Lactobacillus_brevis_ATCC_367ATKGSKITVKATkNAKtNLaSgTASKTTGKYSIKLSKkLKknANVYVYATNskTKAYFYR
 
28379493Lactobacillus_plantarum_WCFS1VIRVQtAkTtASSTKkTTnKtTTTKKvaTKsTaaTSSSKkTtkSFkVnaPaGTWkSNTtN
116332775Lactobacillus_brevis_ATCC_367IIRVQaAsTkAATTKsTStKkTTTKKttTEkS--TTSSKtSaaSFsVktPtGTWtSNTaN
 
28379493Lactobacillus_plantarum_WCFS1KYSQiltFSaKnGfNQtLYKNGKQVKkLVSYAsYSMTAKTPTFWKVSY--KsgsTtKTLY
116332775Lactobacillus_brevis_ATCC_367KYSQkwvFSqKtGlNEyLYKNGKKVKtLVSYAkYSVSAKTPTFWKITYtpKgskTkQTMY
 
28379493Lactobacillus_plantarum_WCFS1LRYTAtnKFtVVNAKNQIVkvKvGnAPAAvWTFTKk
116332775Lactobacillus_brevis_ATCC_367LRFTSakKFkVVNSKNQVIstKaGvAPAAkWTFTKa
 
Copyright © 2010 Miaomiao Zhou
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