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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02927
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted, LPxTG Cell-wall anchored
Domains for cluster Size of cluster 2


Proteins in cluster LaCOG02927
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02927 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02927
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28379399Lactobacillus_plantarum_WCFS1MKlskRGlfwLLGLVsfaiLLLfSQ-pLgAqAATNYhakDYTTAAsViNGPDFKHADTIq
116333057Lactobacillus_brevis_ATCC_367MEkihQGwriLIGLIgllgILIiSQwaVpAhAATNYdgaNFTTAAkVtNGPDFKHADTId
 
28379399Lactobacillus_plantarum_WCFS1IQYqMsFGdTtfkaGDTVTIDmPaNLepRTvGaTFDVTDaETGtVIGtgVVggdGqVVLT
116333057Lactobacillus_brevis_ATCC_367IQYhLdFGtTplhnGDTITLDfPeNLrgKTpGdTFDVTD-ESGeVIGkaVVsdtG-VVIT
 
28379399Lactobacillus_plantarum_WCFS1MNsAiEGKTNvKIdVNLgmKYRYDDlGEQDVVFdtQ-DGqdTSvINMVANEANMSKkGTI
116333057Lactobacillus_brevis_ATCC_367MNdAfEGKTNaKLtLNLatKYRYDDtGEKDVVFplEnNGssTStINMVANEANLSKsGTI
 
28379399Lactobacillus_plantarum_WCFS1dKENGTIKWTLLVDRReItMKNLsIADTIGDHQQMIkGIeVyngeWSSAntYKR-RdkLS
116333057Lactobacillus_brevis_ATCC_367-QDDGTIKWTILVNRKnLhLKNVeISDTIGDHQEMIhGVtVskayWTSAtgYKReKpaMT
 
28379399Lactobacillus_plantarum_WCFS1dDaYQVnYsDnGFDLkFNDtVsnLVvIDYYTKITDTeLIDqnYhFKNkAvMeWGGGTSGg
116333057Lactobacillus_brevis_ATCC_367aDdYQVtYhDqGFDLaFNDdLdqMVaIDYYTKITDSsLIDsgYkFRNnAeMtWGGGTSGt
 
28379399Lactobacillus_plantarum_WCFS1KNSEEANGKVyekvvNgGSGTGDLssssssnssssnnssdvdsssddsnsesssavdsss
116333057Lactobacillus_brevis_ATCC_367KHSEQANGKVssskgNsGSGSGDV------------------------------------
 
28379399Lactobacillus_plantarum_WCFS1ddsssesssavdsssdhsssesssavdsssddsssesssavdsssdhsssesssavdsss
116333057Lactobacillus_brevis_ATCC_367------------------------------------------------------------
 
28379399Lactobacillus_plantarum_WCFS1dhsssesssvvdsssdhsssesssavdsssdhsgsesssdvntssessDnTTtEPDnghq
116333057Lactobacillus_brevis_ATCC_367------------------------------------------------NeTTeEPE----
 
28379399Lactobacillus_plantarum_WCFS1tgdiedpedntavypdiDEDTGTIDvDgGfDSNyDgSttsnStNssKplKDStSSvftst
116333057Lactobacillus_brevis_ATCC_367-----------------DKDTGTIDtDnGtETDaEeAareeTeDkeEatKEAeAAaakkq
 
28379399Lactobacillus_plantarum_WCFS1pAntttgqdgVDQTpAadtkKSSaKtTvSESdaltpsTpNqvaKLPQTNEAkMdsqaLrs
116333057Lactobacillus_brevis_ATCC_367aAkakqtaakVNQTtA--kpKAAvKaTaTQSag---rTvNhnrKLPQTDEApVawatLsg
 
28379399Lactobacillus_plantarum_WCFS1VGILLgVltlGggaLIRhwf
116333057Lactobacillus_brevis_ATCC_367LGLLLaV---GsvrVLRrh-
 
Copyright © 2010 Miaomiao Zhou
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