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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG02876
Product for cluster extracellular protein, DC-SIGN ligand other product description for cluster
Functional class for cluster binding proteins Subcellular location for cluster Secreted, C-terminally anchored
Domains for cluster Size of cluster 2


Proteins in cluster LaCOG02876
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02876 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02876
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
170017634Leuconostoc_citreum_KM20MfssRKmfLLivsfFcVaall---ynspsvSgnStGvvmnGnFkDWEgkyqn----vraN
999990071_116491458Oenococcus_oeni_PSU-1---mKKIIvLitcfFGffllpIV-vvhadSisSgSGIlIDGKFdDWsgkpMTdfyeEGtN
28378760Lactobacillus_plantarum_WCFS1MkKinKLMiLgmlvFGVtgatminpemTtAAhASanITIDGKmnDWKDAtLT----EGyN
116333533Lactobacillus_brevis_ATCC_367-mKlQKIILagavalGLagtaIV-tepTlAAaASSsvTIDGnFsDWQDAnLT----EGyN
 
170017634Leuconostoc_citreum_KM20sdafrhVgiwaDkEnIyfYmdsaPdfrtnnQGGdnqlYlntDftiTvgdeaYpvSS----
999990071_116491458Oenococcus_oeni_PSU-1GnvtykLSmlSDdQYlyLYVnMiP------yGGhqsGlqtagYviTIgnKkYdISflNVP
28378760Lactobacillus_plantarum_WCFS1GyT----ALaSagQYVnVYVKM--------KnGavPGY--GDYnFTIDGKtYyIwSkNis
116333533Lactobacillus_brevis_ATCC_367GdT----ALaSsgkYVeVYVKM--------KnGpvPGY--GDYnFTIDGqkYyIwSdNVP
 
170017634Leuconostoc_citreum_KM20----------------------------GhGfmD--------------------------
999990071_116491458Oenococcus_oeni_PSU-1GNlSaGqTaS--FsaGvWdEtsytYkTnGvGYVN--------------------------
28378760Lactobacillus_plantarum_WCFS1GsVSsGtvKSfTlTGGKWNdGT-QYGTvGtGYVtNDGSHNyAEFQIDLTkLGLTdSASGK
116333533Lactobacillus_brevis_ATCC_367sNVSkGeTKkvTFTGGKtNEGT-QYGTvGtGYVsNDGTHNlAEFRVDLTaLGLTkAANGK
 
170017634Leuconostoc_citreum_KM20------------------------------------------------------------
999990071_116491458Oenococcus_oeni_PSU-1------------------------------------------------------------
28378760Lactobacillus_plantarum_WCFS1qISMvNPNIGSDStTSTVgtITatSTSsSSSTSSsTnansttssssttstssaasssats
116333533Lactobacillus_brevis_ATCC_367sVTMaNPNIGSDSaSTTVddLTnaATSdSASSSSeT------------------------
 
170017634Leuconostoc_citreum_KM20--------------------------------------------nqimnfNnssksVSq-
999990071_116491458Oenococcus_oeni_PSU-1------------------------------------------------------------
28378760Lactobacillus_plantarum_WCFS1saGVItdKstvSSKASSTTDnNAaNDNDNLNIkIDGnFnDWKNVTlTEGYNGYmAMVSDG
116333533Lactobacillus_brevis_ATCC_367--GVIagKedqSSKATTTTDgNAnNDNDNLNIvIDGkFaDWKHVTlTEGYNGYtAMVSDG
 
170017634Leuconostoc_citreum_KM20--------------------vFDI---KYwVWrQEygyqPptvGkAyAqhivaGnr----
999990071_116491458Oenococcus_oeni_PSU-1------------------------------aySEtfP--------AdtslYrkGtY----
28378760Lactobacillus_plantarum_WCFS1kYVYVYVKMKYGqVPGYGDYnFDIGGQKYYVWSnEMP-SsqSdGavkAvsFtgGKYNEGh
116333533Lactobacillus_brevis_ATCC_367nYVYVYVKMKYGlVPGYGDYnFDIGGQKYYVWSKEMPiSPvSaGdAkvvsFtgGKWNEGg
 
170017634Leuconostoc_citreum_KM20--------------SnNIfEaqIpfSalgIkeIpenTkIaisNesIwrGNvsInyAGspT
999990071_116491458Oenococcus_oeni_PSU-1--------------TnsvAEvKIpITdFNlSTISGQs-ITlaNsNl--GyQhIT------
28378760Lactobacillus_plantarum_WCFS1QYGTVGNGYVSqagSHsIAEfRvDLSkFdISTmTGQT-ITMsNPNI--GNQKmTVAGGST
116333533Lactobacillus_brevis_ATCC_367QYGTVGDGYVSsedgHNIAEfKvDLrkFNlSTmTGQT-ITMyNPNI--GNEKVTVAGGST
 
170017634Leuconostoc_citreum_KM20GPwlLAGIsLVfAggGYY-LQnQRRkkiTasaTneviha
999990071_116491458Oenococcus_oeni_PSU-1---IxmGIGflLAlfGfFgItyKKknnhekigfh-----
28378760Lactobacillus_plantarum_WCFS1GPYVISGvGVVIvawGYFkfRkRRRltaTdlpTtkn---
116333533Lactobacillus_brevis_ATCC_367GPYVIAGIGVVIAglGYwrLRksgRlgrSktsTsgk---
 
Copyright © 2010 Miaomiao Zhou
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