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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02864
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster 2


Proteins in cluster LaCOG02864
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02864 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02864
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28378635Lactobacillus_plantarum_WCFS1mkkvvtgaaivaslflmggcsssyskssqsssssvkiskselssKKsqKlEDattdvdsl
116326509Leuconostoc_mesenteroides_ATCC_8293-------------------------------------------mRRppKkQD--------
 
28378635Lactobacillus_plantarum_WCFS1FsdsghtalVpgtkkLLIdeVskeVnklTDSkGkSnlQkelknayvlypklASSVAssnA
116326509Leuconostoc_mesenteroides_ATCC_8293FiqkhplpfIi-cavIIVavIglsI--fSDNsGnSesEs------------SSSVShkqS
 
28378635Lactobacillus_plantarum_WCFS1ASNaKvrSESaSEssvvlsvrESSSkrhLsSkreSSSsNAdkYaNKImNL--GvptHATd
116326509Leuconostoc_mesenteroides_ATCC_8293SSSeEdsSESfSDd-------ESSSsdeIeSsssSSTdNSkdYeDKVnSLlkGtaqYAT-
 
28378635Lactobacillus_plantarum_WCFS1vsySnHTVTWtGFDaWkDYTHpELKklIafLETItyQQSpnYNqkSPkLiVtLsDGTqIA
116326509Leuconostoc_mesenteroides_ATCC_8293ydkStNTLTYvGYDdWaNYSNsDLRdaMdiLETIanRQAvvFDmnNPaInVqLpNGTiIA
 
28378635Lactobacillus_plantarum_WCFS1heEpgrNLiWdN
116326509Leuconostoc_mesenteroides_ATCC_8293tsDgtdDIeFsN
 
Copyright © 2010 Miaomiao Zhou
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