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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG

LaCOG02848
Product for cluster glycosyl hydrolase, family 25 (putative) other product description for cluster lysin
Functional class for cluster enzyme Subcellular location for cluster Secreted
Domains for cluster Glycosyl hydrolases family 25 Size of cluster 3


Proteins in cluster LaCOG02848
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02848 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02848
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


28379290Lactobacillus_plantarum_WCFS1mgIkrlsW-------------LVGtavvatlGmqitVQAqghAVvDISEWQGQLspSQVQ


28378444Lactobacillus_plantarum_WCFS1-mVmQkKWrliLl--------LVGcf----lGgigVVQAha-AVPDISEWQGQLTSteVQ


116332974Lactobacillus_brevis_ATCC_367-mLhQqQWakrLtqavvaasaLiGla----wGsqsVVhAstlAiPDISEWQGkLTSSQVa


 


28379290Lactobacillus_plantarum_WCFS1amKSQVlFVINRrQYGlnYvDrdaaNNTALYVrYGIPFGEYDfsqFTdAASArrEAqaFY


28378444Lactobacillus_plantarum_WCFS1sLKSQadFVINRvQYGsSYeDlYhTsNesLYVKYGvPFGsYDYAtFTStAtAKAEAdkFY


116332974Lactobacillus_brevis_ATCC_367nLKSQVsFVINRrQYGsSYqDlYaTNNTALYVKYGIPFGEYDYArFTSAASAKAEAkdFY


 


28379290Lactobacillus_plantarum_WCFS1aRSNKaARFYaLDFEvNtVrSGSTNAAVaAWYrEMRALTnKKLIFYSYaSFAlTYANqAR


28378444Lactobacillus_plantarum_WCFS1qRaNKNtKFYVLDFEttsmsStAaNAAVKAWYtEMRsLTSKKLIFYSYQSFATTYANTAR


116332974Lactobacillus_brevis_ATCC_367nRSNKNAqFYVLDFEeNdVtSGtTNAAVKAWYeEMsALTSKKLIFYSYQSFATsYANTAR


 


28379290Lactobacillus_plantarum_WCFS1QrFDAQWIgaltpnpPiISaALWQYTNrYhLagLaapVDN----SrviTSVHPVSWWlg-


28378444Lactobacillus_plantarum_WCFS1QsFDAQWIANYSsk-PTISfsLWQYsssYYLSSLGqYVDNslydSasVTtyHPLSWWtsg


116332974Lactobacillus_brevis_ATCC_367QnFDAQWIANYStt-PTISyALWQYTDnnYLSALGeYtDN----SqaVTSVHPISWWmd-


 


28379290Lactobacillus_plantarum_WCFS1---tahgApSvVikAqprlKvmhdrhLtmpAhnqqhgraGqAVvAikRpavqpAvKTrpV


28378444Lactobacillus_plantarum_WCFS1tsaSssTsststTYAYSSYtkgQHvYLnnGAssYyD---GTkVpSsakkKYYkvtaTKSV


116332974Lactobacillus_brevis_ATCC_367---SvtTAlShVTYAYSSYKagQHiYLhkGAtKYvD---GTAistadRqKFYaisKvKSl


 


28379290Lactobacillus_plantarum_WCFS1qqkavsnKSRSqtvVrVkrrslqtiSvnshhgkitQHrvirrRatqpkviklkaTrRTGt


28378444Lactobacillus_plantarum_WCFS1------TKSRSKQlVYLSglnKWVLSQDvTGyWVGQHGlYqlReKstlFkdvnLTtsTGk


116332974Lactobacillus_brevis_ATCC_367------TqSkSKQalYISslGKWVLSQDaTGfWVGQHGsYtlRqKlniYsnaaLTkKTGs


 


28379290Lactobacillus_plantarum_WCFS1qFKlnTskAtKLrr--pGKsiRtKpvarSKGrtrqRltrrqpslrqrVtrnr----qsrr


28378444Lactobacillus_plantarum_WCFS1tlKkGgiysGKLvK--SGnfYRIKv---SgGYItAKvskSDHwYYESVpSsgwIkaKvgl


116332974Lactobacillus_brevis_ATCC_367sYasGTtvAGtvvKapSGKsYRIKt---SKGYIsAntqySNHaYYESlgSaktIttKkkv


 


28379290Lactobacillus_plantarum_WCFS1hTlRvtvqrRgstirraprrqRIqirpVhntSrdkRgls-----------------


28378444Lactobacillus_plantarum_WCFS1YTYKsSnfvKSNRhayhaaGdRIkVTkVysRSgGSRYYltNkGnYVSAnRSnVvTQ


116332974Lactobacillus_brevis_ATCC_367YeYskStfkqANRasavtkGtkltVTaVkKRStGSRYFvlSnGkYVTAlQSyV-TE






 



 
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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