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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Method
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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02801
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Secreted, LPxTG Cell-wall anchored
Domains for cluster SCP-like extracellular protein , Gram positive anchor Size of cluster 3


Proteins in cluster LaCOG02801
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02801 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02801
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28377751Lactobacillus_plantarum_WCFS1----mnKkLlYTSittAALfvgtqlgvNNAqadtATdNsdtTnqtsatqgsaqtatnekl
42518229Lactobacillus_johnsonii_NCC_533-----MKGLKYTSLAVAALTATllASTNNSKVQAATvdKNnT------------------
116628824Lactobacillus_gasseri_ATCC_33323meekkMKGLKYTSLAVAALTATilASTNNgKVQAAstNENdT------------------
 
28377751Lactobacillus_plantarum_WCFS1aTVkptsqqqyQanVqtAkgnVatAQnqVnttqtkvatAQgQvtnqsqlvaigqsqYDAg
42518229Lactobacillus_johnsonii_NCC_533VTVAKSDKEKlQdaVNQAQNSVNNAQasVDSKKStLTDAQaQAkaPN-------DAcDAQ
116628824Lactobacillus_gasseri_ATCC_33323VTVAKSDKEKaQaaiNQAQNSVNNAQtvVDSKKSaLTDAQekAqaPD-------NAYsAQ
 
28377751Lactobacillus_plantarum_WCFS1kAqVdraQqtLdannqVlaeAenKvDaAksqtaaAetq-IpadQqqIAAnkvAIaNqpat
42518229Lactobacillus_johnsonii_NCC_533QAKVNDSQKNLadKqaIakQAQDKLDSAsavAKQATsENIQKtQKNIAAQQdAIKaAkQN
116628824Lactobacillus_gasseri_ATCC_33323QAKVNDSQKNLsaK-----QAQDKLnSAteiSKQATpENIQKaQKNItvQQdAIKNAqQN
 
28377751Lactobacillus_plantarum_WCFS1eKkAqtakDaAvtaLtqAKteQAtAQ------------sDadaAsAvTaaKqatvDqAsa
42518229Lactobacillus_johnsonii_NCC_533vsDANADlstAQSQLATAKQKQADAQNLVNSKEAAKKTADnNVAnAETaVKNSGLDEAKQ
116628824Lactobacillus_gasseri_ATCC_33323vnDANADlNkAQAQLATAKQKQADAQNVVNAKESAKQTADkNVAKAEsdVKNSGLDEAKQ
 
28377751Lactobacillus_plantarum_WCFS1aqQKaaTqaNqaKvavAsaqdAvNKNtqAinsaktaIqnttsQInanNQAVstAQakVtA
42518229Lactobacillus_johnsonii_NCC_533nvQKVQnaLNDIKKTnADNESvLSKNqavLaENNQKIATVNNnlavaNkAVvDAQNNVNA
116628824Lactobacillus_gasseri_ATCC_33323dveKVQTtLNDIKKTnANNESiLttNksALtENNQKIATVNNKIataNQAVvDAQNNVNA
 
28377751Lactobacillus_plantarum_WCFS1aQaALAaAERpttttesQnkydaaefpQsQltGAetvsvAypsNgkyvpnadkinQymfE
42518229Lactobacillus_johnsonii_NCC_533KQkALADAQqALKDLQDQ-------VAQDQASGAAGFFKAIADNKDNsESLREdaQTAYN
116628824Lactobacillus_gasseri_ATCC_33323KQqALADAkKALKDLQDQ-------VAkDQASGAAGFFKsIADNKDNsESLREdarTAYD
 
28377751Lactobacillus_plantarum_WCFS1yInqlralnGQPalkQtsTlQnnaiAraAaQvdgglDhTgsSyaEnltqvYpqWf-----
42518229Lactobacillus_johnsonii_NCC_533IIT------GQPNAYQDiTVE---WAKeAVkLGQEnDSTSlSNiEKALGYYqHWMTYRDK
116628824Lactobacillus_gasseri_ATCC_33323IvT------GkPNAYQDiTVr---WvKqAVELGQEkDSTSfSNmEKALGYYeHWMTYRDK
 
28377751Lactobacillus_plantarum_WCFS1--mSdqetaynAVm--------------------------gwYDesnnvesGsfghrvNl
42518229Lactobacillus_johnsonii_NCC_533YGLSHPSISLTAVAIAMLSSDFQHYSDEFNHPsLLTSKYGPFYsDEEDISAGEVNPidNW
116628824Lactobacillus_gasseri_ATCC_33323YGLSHPSISLTAVAIAMLSSDFQHYSDEFNHPiLLTAKYGPFYEDEEDISAGDVNPidNW
 
28377751Lactobacillus_plantarum_WCFS1iystgDagvaInlakhvAAfevdnAg-mTEaqqdKyVDlf--------------------
42518229Lactobacillus_johnsonii_NCC_533MsEKdDIDkYIEaHPDAAAYSFEStHPLTqDEWeKdVDFWNDKPVyIGHYTSMIKPDANY
116628824Lactobacillus_gasseri_ATCC_33323MsEKeDIDnYIKdHPDAAAYSFESSHPLTEDDWardVDFWSNKPVdIGHYTSMIKPDANY
 
28377751Lactobacillus_plantarum_WCFS1--------------DNAhtnaatgtkalpaVtFN--------YvQttpadpK------ki
42518229Lactobacillus_johnsonii_NCC_533VGLAGNEYEIQPmMnNADSMDEIiFnPINGIDFNSYQNLVqSYLkdVKQEDKINTLKANV
116628824Lactobacillus_gasseri_ATCC_33323VGLAGNEYEIEPfMDNADSMDEIeFdPINGmDFNSYQNLVhSYLQnIKQEDqINTLKANV
 
28377751Lactobacillus_plantarum_WCFS1AaANatLIAAtaslnglQNtgKtLattLAnqN---------------------asLqalQ
42518229Lactobacillus_johnsonii_NCC_533ATANQNLVAAQNAVKSAQNNvqSLQANLAElNNGSTKINKAISDTQaALAKGQENLEFeQ
116628824Lactobacillus_gasseri_ATCC_33323eTAsQNLtAAQNAVQAAQNNvKSLQANLAElNNGSTKINKAITDTQdALAKGRENLEFeQ
 
28377751Lactobacillus_plantarum_WCFS1nQtsglqaTvttkQAqVqvaAtsLkaAnvAltqAqgqLAtAQqqqlspvrnlKtSiAKta
42518229Lactobacillus_johnsonii_NCC_533KQLDQANqTLAdvQAKVGtKAKALEDAKAAQAKAAeAvAQAQNvlseATAaVKASqAKVD
116628824Lactobacillus_gasseri_ATCC_33323KQLDQANknLAavQAKVGaKAKALDDAKAAQAKAAdALAQAQNvlagATAaVKSaqttVD
 
28377751Lactobacillus_plantarum_WCFS1aAQvtatqaaKNLaStKtliadLtaenarLaav---LAqgQAqvdtANEqlaAgkaqldr
42518229Lactobacillus_johnsonii_NCC_533aAQndVqAKdnNLKSvqAaLdSLnQalnnLEnAQSNLsaAQtAfnkANDDVtAAnKaVKA
116628824Lactobacillus_gasseri_ATCC_33323nAQgnVnAKnKdLKaaKAsLeSLkQtlssLEsAKANLAsAQAAltaANNDVltAdKdVKA
 
28377751Lactobacillus_plantarum_WCFS1kktdLaqfKqvlGaArvdlAvAQgDLtatkAfLArvea------------NKftTttAaa
42518229Lactobacillus_johnsonii_NCC_533QQLiLdtLKEsKsKADAQVtnAseeLKKAEAeLAaEQSKLeDAKARLdafNKkeTeNShK
116628824Lactobacillus_gasseri_ATCC_33323QELiLasLeEaKGKsDAQVAsAEkDLKKAEAaLAnEQSKLaDAKAKLaelNKkannNtgK
 
28377751Lactobacillus_plantarum_WCFS1aDgiAEt----TNvdqStgVTaP------------------------------haTaTKt
42518229Lactobacillus_johnsonii_NCC_533eaSnAEnpvtpTNkpdtshVvKPsdKTdedstvkptdkpdSHSEasttNsSetttTaTes
116628824Lactobacillus_gasseri_ATCC_33323sDSkpEi----nNqkpAkpaTKPgsES-------------ANTEkpepDfSgnnksdsKk
 
28377751Lactobacillus_plantarum_WCFS1vaNSngTi-------------------naTstsVDvSDgdvttklvaGakqq--------
42518229Lactobacillus_johnsonii_NCC_533dvkdTDTVKeNaKADlKTNnksEEk--SSTvKiiDnSDsSavSvVLnGSNTpVKtFGEKT
116628824Lactobacillus_gasseri_ATCC_33323eqNSTDnVKsDvKSEnKSNktkEEsksSSsvKiVDngDdStaSvVLaGSNTaVKvYGEKT
 
28377751Lactobacillus_plantarum_WCFS1-----------------------pVaaQATa--LPQTdeKqsasltVvGLlaAGfsL---
42518229Lactobacillus_johnsonii_NCC_533VNGTTYYKVsANrWVKdDKAHVVaVtGnvTTnKLPQTGAKNELiAALsGLaVAGttLvSy
116628824Lactobacillus_gasseri_ATCC_33323VNGTTYYKIgANhWVKaDKAHVVsigGQATTkQLPQTGAKNELiAAIsGLtVAsvgiaSa
 
28377751Lactobacillus_plantarum_WCFS1LGLtklrKra
42518229Lactobacillus_johnsonii_NCC_533LGINRKKKNN
116628824Lactobacillus_gasseri_ATCC_33323mGmSRKKKNN
 
Copyright © 2010 Miaomiao Zhou
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