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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG02620
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG02620
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02620 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02620
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
15673539Lactococcus_lactis_lactis_IL1403MNSRKsKkvRKgRGGKIFAILLSIVIFfALIIFGVVMIGRqVISSQTDNIAAKFlPsSgs
116512354Lactococcus_lactis_cremoris_SK11------------------------------------MvGRHVISSQTDNIAAKFIPDS--
125623785Lactococcus_lactis_cremoris_MG1363MNSRKrKteKKrRGGKVFAILLSLIIFlALIVFGIVMIGRHVISSlTDNIAAKFIPES--
 
15673539Lactococcus_lactis_lactis_IL1403sgssegsasvTDAvsQmGSATPSAIAtKLNENaDvIKSQSQGmIsSAKATSTsSKvTYTL
116512354Lactococcus_lactis_cremoris_SK11-------QNLTDAADQIGSATPSAIASKLNENSDTIKSQSQGLINSAKATSTDSKLTYTL
125623785Lactococcus_lactis_cremoris_MG1363-------QNLTDAADQIGSATPSAIASnLNENSDTIKSQSQGLINSAKATSTDSKLTYTL
 
15673539Lactococcus_lactis_lactis_IL1403ESSKLNKATVGALLLASGDQVeeVADKVLDSMKKAGVAQPKLQvDLTDDKGNvIKTLnYS
116512354Lactococcus_lactis_cremoris_SK11ESSKLNKATVGALLLASGDQVKDVADKVLDSMKKAGVAQPKLQIDLTDDKGNIIKTLDYS
125623785Lactococcus_lactis_cremoris_MG1363ESSKLNKATVGALLLASGDQVKDVADKVLDSMKKAGVAQPKLQIDLTDDKGNIIKTLDYS
 
15673539Lactococcus_lactis_lactis_IL1403A
116512354Lactococcus_lactis_cremoris_SK11A
125623785Lactococcus_lactis_cremoris_MG1363A
 
Copyright © 2010 Miaomiao Zhou
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