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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG02470
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster variable
Domains for cluster Viral A-type inclusion protein repeat Size of cluster 3


Proteins in cluster LaCOG02470
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02470 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02470
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
170016950Leuconostoc_citreum_KM20MrfKKIIvAsivviafFSSvIGVKaaiD--WtVGHqnmQatadNIDkLvNRinSlkgeaS
15672572Lactococcus_lactis_lactis_IL1403MKIKKIIIAatTFAIVFStCIGiKSLADNYW-tGHGEIQTINNNIDTLsNRVKSKNQvIS
116512229Lactococcus_lactis_cremoris_SK11MKIKKlIIAvaTFAIVFSACvGVKSLADNYW-VGHGEIQTINNNIDTLsNRVKtKNQtIS
 
170016950Leuconostoc_citreum_KM20qnqQelAdLKnqlkSQqqQyqdLvnQ-------KnNEeeAlkkEIqqKIdEGNQKVAaKQ
15672572Lactococcus_lactis_lactis_IL1403DlNQTIAnLKsSVDSQSsQVNSLQTQLtQANvDKQNEiNAKiNEINtKIaEGNQKVADKQ
116512229Lactococcus_lactis_cremoris_SK11DlNnTIstLKGSVDSQSaQVSSLQTQLaQANtDKQNEiNAKiNEINsKIaEGNQKVADKQ
 
170016950Leuconostoc_citreum_KM20qEVDqlNskISdLNkQLdD-kkhSednllQALqdaQnlknKSDQAVaqtk
15672572Lactococcus_lactis_lactis_IL1403KEVDtANQTISQLNQQLNDLRQKSGQDndQALREVQDTRaKSDQAVKDAQ
116512229Lactococcus_lactis_cremoris_SK11KEVDsANQTISQLNQQLNDLRQKSGQDndQALREVQDTRaKSDQAVKEAQ
 
Copyright © 2010 Miaomiao Zhou
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