LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

LACOG

LaCOG02271
Product for cluster	ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein	other product description for cluster
Functional class for cluster	transport	Subcellular location for cluster	N-terminally anchored
Domains for cluster	NMT1/THI5 like , Bacterial extracellular solute-binding proteins, family 3	Size of cluster	4

Proteins in cluster LaCOG02271
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color legend:

Corrected sequence

Pseudo gene

Domain structure of LaCOG02271 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment for LaCOG02271
Color legend:		Corrected sequence		Pseudo gene		Gene made from mutiple pseudogenes


116492135	Pediococcus_pentosaceus_ATCC_25745	mlKHKKffsliVllpIftLlLtacGksnsaaktqti-TValdwtpntnhtglyvAqekG-
116618252	Leuconostoc_mesenteroides_ATCC_8293	-MtqlvrktmLVIfLfLWavcAIYGYTQTiekkTtLqTiTIGYQKgDP---IDIAKQHGE
116495894	Lactobacillus_casei_ATCC_334	-MKHKKHlWFLVIgLIMWLsVAVYGYTQTTTAaSDLETVTIGYQKaDP---VDIARQHGE
191639377	Lactobacillus_casei_BL23	-MKHKKHlWFLVIgLIMWLsVAVYGYTQTTTAaSDLETVTIGYQKaDP---VDIARQHGE

116492135	Pediococcus_pentosaceus_ATCC_25745	---yfKkhhlKVkFvqpSkdsAe-QivASGkaqigisGqdslasAigkknplpLtAmGAi
116618252	Leuconostoc_mesenteroides_ATCC_8293	LIKnMKkQGYKiVyREFaDGAAeMQALASGSIDYARtGDTPPVTAqASkTDItyIAvGAS
116495894	Lactobacillus_casei_ATCC_334	LIKkMKAKGYqVVFKEFSDGAAlMtALkSGAIDYARvGDTPPVTAkAAGTDIaLIAAGAT
191639377	Lactobacillus_casei_BL23	LIKkMKAKGYqVVFKEFSDGAAlMtALkSGAIDYARvGDTPPVTAkAAGTDIaLIAAGAT

116492135	Pediococcus_pentosaceus_ATCC_25745	lQHntSGImsrKadgITspKKmqGyRyAtwntptelatIkQvvKddGgdfskVKtVpnNi
116618252	Leuconostoc_mesenteroides_ATCC_8293	KssG-SaILIpqSSslskisdLKGKRIAYtqGTsSQYLllsALKKAGlSssDVtLVNMkQ
116495894	Lactobacillus_casei_ATCC_334	KEYG-SGILVgKNSqITNlKQLKGKtIAYqKGTAAQYLIiQALKKAGlStNDVKLVNMDQ
191639377	Lactobacillus_casei_BL23	KEYG-SGILVgKNSqITNlKQLKGKtIAYhKGTAAQYLIiQALKKAGlStNDVKLVNMDQ

116492135	Pediococcus_pentosaceus_ATCC_25745	tDevaglkskAaDAiWifygwaginAEiknypvnyfsfrsinpvfDyytpliIgnnsFlK
116618252	Leuconostoc_mesenteroides_ATCC_8293	tDASIAFSqGkIDA-WVTWDPYTAqAEVsQnAKvLTtGkrLSKNRDF----LlSTksiAK
116495894	Lactobacillus_casei_ATCC_334	SsASVAFAKGSVDA-WVTWDPYTATAqVNQgAKlLTNGTgLAKNRDF----LISTQNYAK
191639377	Lactobacillus_casei_BL23	SsASVAFAKGSVDA-WVTWDPYTATAqVNQgAKlLTNGTgLAKNRDF----LISTQNYAK

116492135	Pediococcus_pentosaceus_ATCC_25745	qnpkaaKafmaaatEgyqyAtknpkasadLLmKavpelksnqkliyksqnYlskyyltkD
116618252	Leuconostoc_mesenteroides_ATCC_8293	knkkVSsyLvkYLsqDMkWANNnkSEvskLLAKsLsmkqsVIEKMVkRRdf-tMtgIt--
116495894	Lactobacillus_casei_ATCC_334	THtALSKlLTTYINDDMTWANNHhTQliamLSKTLKlsDAVIQKMVERRTY-AMalVKAD
191639377	Lactobacillus_casei_BL23	THiALSKlLTTYINDDMTWANNHhTQliamLSKTLKlsDAVIQKMVERRTY-AMalVKAD

116492135	Pediococcus_pentosaceus_ATCC_25745	gqfgkidamrwNnFYkwlndhkLVeQKlaknqgftNqylpkq
116618252	Leuconostoc_mesenteroides_ATCC_8293	SAVlkEqqsIANlFY----EEGLinkKItIKdTVLNt---Tn
116495894	Lactobacillus_casei_ATCC_334	SSIvDEEnQIANtFY----QEGvVTEKVdMKtTLVsg---SD
191639377	Lactobacillus_casei_BL23	SSIvDEEnQIANtFY----QEGvVTEKVdMKtTLVsg---SD