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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG02082
Product for cluster ABC-type oligopeptide transport system, substrate-binding protein other product description for cluster
Functional class for cluster transport Subcellular location for cluster Lipid anchored
Domains for cluster Bacterial extracellular solute-binding proteins, family 5 Middle Size of cluster 5


Proteins in cluster LaCOG02082
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02082 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02082
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116618932Leuconostoc_mesenteroides_ATCC_8293MnKnirwa--aGviiVAaiSGvL----ftknndgdvsKvRTLqVmmkDdvmTmnPimttD
28379980Lactobacillus_plantarum_WCFS1MqakYtysI-IGvvsallLtGCLgavsnsskttsTADqNRTLgiTipgEPmTtDPttSie
116332705Lactobacillus_brevis_ATCC_367MnKvmglg--VGLLaVmaLaGC------GaqAksTtD--kaLNVTmtgnPATanPaiSgD
116332692Lactobacillus_brevis_ATCC_367-MKhFvwtlPVGLLlLAsLSGC------GhaAghTtnKNRpLNVTLasEPATaDPnkStD
116332695Lactobacillus_brevis_ATCC_367-MRrFvslIPItLLlLAgLSaC------GskS--sAnqNkTLNVTLaDEPATvDPnkdtD
 
116618932Leuconostoc_mesenteroides_ATCC_8293iySsqaqdQvyEGLYrY-KgNKvVpamAEKIVKPsqNGTvYTFkirdNAKWSNGDKVTAQ
28379980Lactobacillus_plantarum_WCFS1TNgGaVItQTgEGiYrkNaNNKIVAGVvEKkVKPTeNkTrYTFTirKNArWqNGtKiTsQ
116332705Lactobacillus_brevis_ATCC_367TNSsSMIsQTsEGLYTlNsHgKvIAGVAEKVVKPTkNGTvYTFkLKKNAKWqNGDaVTAQ
116332692Lactobacillus_brevis_ATCC_367TNSGSLIfQTmEGLYTYNRNgKItAGVAtKMVtPTNNGktYTFTLKKqAKWANGqRVTAQ
116332695Lactobacillus_brevis_ATCC_367TNSaSVIaQTmEGLYTYsKSNKIIpGVAtKVVKPTNhGktYTFTLKKtAKWANGqRVTAQ
 
116618932Leuconostoc_mesenteroides_ATCC_8293DFVTaiRatAdPKTKSQasADaiSimKNYDsVhvGamtPdKLGVKAidshTvQItLTqAt
28379980Lactobacillus_plantarum_WCFS1DFVTaLRrqANPtTKSQ-nlDaiSyiKNfDAVnkGKmAvnKLGVtAiNKrTfsIKLsKpV
116332705Lactobacillus_brevis_ATCC_367DFVTSmdwqvNPQsKSQ-vAnkLkyvKNYsAiQaGKkAaStLGVKALNqrTLQItLTqpq
116332692Lactobacillus_brevis_ATCC_367DFVTSLqrMANPKTKaQ-yAsvLSaFKNftAVQtGKaAPSKLGiKALsstkLQfQLTKAV
116332695Lactobacillus_brevis_ATCC_367DFVTSLRrMAdPtTKaQ-yAsvLSaFKNYNAVQhGKlAPSKLGitALsKtkLQIQLTKAV
 
116618932Leuconostoc_mesenteroides_ATCC_8293PsF-DklATAiiPvNTknyaKw-GnKYGTaseymVtNGAYQmnGWTGtNsSfmftKNsnY
28379980Lactobacillus_plantarum_WCFS1PYm-nyefTSFYPLNTeaVQKY-GSKlGsNsAtTVaNGAYvikGWkGSNDSWyYVKNkyY
116332705Lactobacillus_brevis_ATCC_367PWlpDilATAvYPikTSlfKqvgGSKYGTsAAkTmSeGAYKLvGWnGaaDSWsYVKNpHY
116332692Lactobacillus_brevis_ATCC_367PYFNDliAseYYPLNTAaVKKY-GaqYGTsAAkTVSNGAYKLvGWTGSNaSWsYVKNrHY
116332695Lactobacillus_brevis_ATCC_367PYFNDlvAskYYPLNTAaVRKY-GSKYGTNAAramSNGpYKLvGWTGSNstWrYVKNpHY
 
116618932Leuconostoc_mesenteroides_ATCC_8293WsAKrVqIEkVKVrViKtpmTAANeFknkhldiaqLSdEYiKtykNtKyyHaTpqavvrg
28379980Lactobacillus_plantarum_WCFS1WNAKNVKIKRiKVtVTKDdnTAqNLFNAGtVQvTniSGQYVKnNaNNsQMtvTktGrnNy
116332705Lactobacillus_brevis_ATCC_367WNAKNVKIKRVnVqVvKDagTssNLFkSGKVQETvLtGQYiKqNaNNpEMtTTlnssmrf
116332692Lactobacillus_brevis_ATCC_367WNAdsVKInRVKVaVTKDesTAANLFNAdKVQETtvtGnYVraNrNsKnLHThltGrlqy
116332695Lactobacillus_brevis_ATCC_367WNAqNVKIhqiKVaVTKDstTAANLFNAGKIQETtvSGEYVraNgNsKQLHThllGrmNl
 
116618932Leuconostoc_mesenteroides_ATCC_8293iYFNetsdkTnNQhLRQAFgYlIdREAiTsNVmnDGSmpqsnAVPKGimTNPiTGaDFtK
28379980Lactobacillus_plantarum_WCFS1iYFNSKKSvTaNENfRhAlSlvINqKtLaKdVLQDGSqAAtniVPKnyasdPtTGEDFvK
116332705Lactobacillus_brevis_ATCC_367LeFNdKRTiThNtkvRQAFSYvvNRQALTENVLQDGSKAAtSliPsGdgTNPkTGKDFtK
116332692Lactobacillus_brevis_ATCC_367LYvNSKKTaTnstNLRQAiSnAINRsqLTKsVLQDGSKAALSAVPtGdqkNPqTGQDmAa
116332695Lactobacillus_brevis_ATCC_367LYFNSKRqtTasENLRQAvSYAIdRnqLTnsVLkDGSKAALSAVPRGdqTNPqTGKDmAs
 
116618932Leuconostoc_mesenteroides_ATCC_8293daGtqfkvdkKKAqseWsaYlqsiGKnnATftMtfDDdstsrKVGaYiQyaAEhtfkGis
28379980Lactobacillus_plantarum_WCFS1EVGNLsptNiKQAKqYWQKaqKElGKqnvTLNfLcDDTDtEKKlaeYvQgvAEKyLkGvT
116332705Lactobacillus_brevis_ATCC_367EVGNLvsyNpqKAtklWQQakqElGikKAsLeLLTaDTDEqKhaaqYLQqqAqKyLPGLT
116332692Lactobacillus_brevis_ATCC_367qVGNLlpqdkqQAKtYWQKYlKEtGQtKATLNLLTDDTDDDKKVGtYLQselEKtLPGLT
116332695Lactobacillus_brevis_ATCC_367EVGNLltyNvstAKrYWQRYlKEaGKtKvTLSILTDDsDDDKKVGtYLQsvlEKnLPGLT
 
116618932Leuconostoc_mesenteroides_ATCC_8293IntkyVPHsQvVSevlkqdFDmvniGlSvnvpDAAypLaigktGyglNFsKvSDkTYDgy
28379980Lactobacillus_plantarum_WCFS1IkIvaVPHAtHVSRDFtGNFDlvtvGWgpDypDAqNFLdgmqssNSINFTqWkDakYDaL
116332705Lactobacillus_brevis_ATCC_367ITIksmPlAQqiakgaAGNFDIdldGWtTDWrDpADFLqmAdgtsSVNFTKWqnthftnL
116332692Lactobacillus_brevis_ATCC_367ITttaIPHAQHVaRDFAGNFelnltGWSTsWlDAADFLslAakGNSVNFTnWSDtTfnqL
116332695Lactobacillus_brevis_ATCC_367ITLtqIPHAQHVSRDFAGNFDInliGWSTnWlDAsDYLdlAakGNSVNFTnWNDqTYnqI
 
116618932Leuconostoc_mesenteroides_ATCC_8293LTmAatQvs-dtkkRYetLqvAnEYftKIKaYmvPIYQPvtAnvVtdkiGGfkgnsF--H
28379980Lactobacillus_plantarum_WCFS1maKvsNtAkYTaaqRwtyekqADRrLMKLdavI-PtYQaSsAfLVSKdVGGLqWdeFsgt
116332705Lactobacillus_brevis_ATCC_367mkKvdDtAtYTtmqRwNlMkqADtYvtKqaGlV-PLYQqAKAhLVSKtVGGLTYTmt--t
116332692Lactobacillus_brevis_ATCC_367LTKAnSQ---TGlARYNgLmaADKrLMaVKGYI-PLYQPSEAkLiSnqVGGLTYTll--H
116332695Lactobacillus_brevis_ATCC_367LTsAeNQ---sGqARYNgLvkADKYLMRVKGYV-PLYQPSEAkLiSKqVGGLTYSll--N
 
116618932Leuconostoc_mesenteroides_ATCC_8293spaYQdmYWK
28379980Lactobacillus_plantarum_WCFS1ssQlQYAYWK
116332705Lactobacillus_brevis_ATCC_367DAQYkYAYWK
116332692Lactobacillus_brevis_ATCC_367EAkYQYAYWK
116332695Lactobacillus_brevis_ATCC_367DAQYQYAYWK
 
Copyright © 2010 Miaomiao Zhou
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