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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG02019
Product for cluster cell surface hydrolase, membrane-bound (putative) other product description for cluster hydrolase of the alpha/beta superfamily
Functional class for cluster enzyme Subcellular location for cluster N-terminally anchored
Domains for cluster alpha/beta hydrolase fold Size of cluster 4


Proteins in cluster LaCOG02019
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG02019 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG02019
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116496299Lactobacillus_casei_ATCC_334-MKQshLigLatPLlLsAgTLA--TAEsfYqyAFrRiNYiPdarrsmQKYAASYYRhVhW
191639842Lactobacillus_casei_BL23-MKQshLigLatPLlLsAgTLA--TAEsfYqyAFrRiNYiPdarrsmQKYAASYYRhVhW
28379634Lactobacillus_plantarum_WCFS1mkKtRaVagIsAPvaIfsaaLf--asEkLYdFAFKRVdYVPETSADKQKYAdAYYaYVDW
116332900Lactobacillus_brevis_ATCC_367-MKkRtLtltlpligIaAtSLA--asEhLfNFAFKRVNYVPETSADKQKYAdAYYaYVDW
184154505Lactobacillus_fermentum_IFO_3956-MqQakkrrLlAsvaagtlgLSylTAEyLfNFAFKRVdYVPETSADKQKYAAqYwRYVDW
 
116496299Lactobacillus_casei_ATCC_334VESQaniEaWHMTApD-nqRLeAlWlPhpg-SKKAVIVgHGYKGtGiTMsNFAHMFyDLG
191639842Lactobacillus_casei_BL23VESQaniEaWHMTApD-nqRLeAlWlPhpg-SKKAVIVgHGYKGtGiTMsNFAHMFyDLG
28379634Lactobacillus_plantarum_WCFS1Lh-RqpvqqWqLnAnDeaNhLvAqyVPAkttSnrtVIVSHGYKGdGeTMANyAYMFHqmG
116332900Lactobacillus_brevis_ATCC_367yQ-hvtkEkWYLhehDpkNRmvAeyIPAatpSQqtVIiSHGYKGNGeTMANFAqMyHhLG
184154505Lactobacillus_fermentum_IFO_3956fk-KvekEhWtwStdDgddqmsAyfIPAdd-StKAVIiSHGYKGNGeTMANyAkMFHELG
 
116496299Lactobacillus_casei_ATCC_334FNVLLPDDRGHGESdGqYISFGWLDRLDYLGWLQRIIDRiGADSQLLLFGtSMGGATVsl
191639842Lactobacillus_casei_BL23FNVLLPDDRGHGESdGqYISFGWLDRLDYLGWLQRIIDRiGADSQLLLFGtSMGGATVsl
28379634Lactobacillus_plantarum_WCFS1yNVLLPDDRGHGqSAGKYISFGWqDRrDYLGWidkVvrinGrhTdiiLFGVSMGGATVEM
116332900Lactobacillus_brevis_ATCC_367FNVLLPDDRGHGESAGeYISFGWLDRLDYLqWiQqVIDRstADvniLLFGVSMGGATmEM
184154505Lactobacillus_fermentum_IFO_3956FNVLLPDDRGHGqSAGKYISFGWLDRLDYLtWLnRlIkRlGAqTKLLLFGVSMGGATVEM
 
116496299Lactobacillus_casei_ATCC_334vaGEPSLPKQVKAvIeDCGYtdvEtELAYLLKkQFHLPpmPLvPLaSFlNyRRLGYpLrv
191639842Lactobacillus_casei_BL23vaGEPSLPKQVKAvIeDCGYtdvEtELAYLLKkQFHLPpmPLvPLaSFlNyRRLGYpLrv
28379634Lactobacillus_plantarum_WCFS1MSGE-eLPsQVKAIIADCGYSSIEEELAYLLKRQFHLPKYPfvPiVSFINRhRmGYYLsD
116332900Lactobacillus_brevis_ATCC_367LSGE-TLPpQVKAIIADCGYSSIEaELtYLLKRQFHLPKYPIePLVStIsKRRLGYYLgD
184154505Lactobacillus_fermentum_IFO_3956LSGE-dLPpQVKAIIADCGYaSIhEELtYLLKRQFHLPEYPIyPLVStINRhRLGYYLgD
 
116496299Lactobacillus_casei_ATCC_334VNvrqaLtRNHLPlLvIHGAeDVYVPTkMgrqNYAASaGPKALWIVPGAAHAESyWINPE
191639842Lactobacillus_casei_BL23VNvrqaLtRNHLPlLvIHGAeDVYVPTkMgrqNYAASaGPKALWIVPGAAHAESyWINPE
28379634Lactobacillus_plantarum_WCFS1VsSvEQLKhNHLPIfFIHGdKDVYVPSwMlkENYqAakGPKqmWqVPnAtHAESFWIdPa
116332900Lactobacillus_brevis_ATCC_367VtStDQLRKNtrPILFIHGeKDVYVPvgMayENYAAthaPKqLWIVknAsHAESFWmNPE
184154505Lactobacillus_fermentum_IFO_3956isStDQLKKNHrPIfFIHGeKDtYVPasMalENYqAtdaPKeLWIVdhAsHAESFWldPt
 
116496299Lactobacillus_casei_ATCC_334AYQAHVKrFLDifF---
191639842Lactobacillus_casei_BL23AYQAHVKrFLDifF---
28379634Lactobacillus_plantarum_WCFS1eYQrHVtAFLnhYvpdk
116332900Lactobacillus_brevis_ATCC_367rYQqrVtAFLqtYFk--
184154505Lactobacillus_fermentum_IFO_3956AYrAHiQAFLnkYFy--
 
Copyright © 2010 Miaomiao Zhou
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