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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG01999
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster variable
Domains for cluster Size of cluster 9


Proteins in cluster LaCOG01999
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01999 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01999
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28377801Lactobacillus_plantarum_WCFS1mksgKhRVsL-lIllclmVvglaGCH--------------NkAYsqsiEKGlnAvaenKY
90962456Lactobacillus_salivarius_UCC118-MMKr---WMfWlItaiVVvlvfvgFgYtkkret------qkqfdnlMsQaiTnAQAteY
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842--MKKStIWs-iVVvavlalggaGaYfYSSqqkQsQeQTVSsSYsShMQaGKeAvKAKKY
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365--MKKStIWs-iVVvavlalggaGaYfYSSqqkQsQeQTVSsSYsShMQaGKeAvKAKKY
42518239Lactobacillus_johnsonii_NCC_533-MMKrSKlgV-aItafFItflaVGCsntSSNNssNsg---SDkYttyMnQGKdAAsSQKY
116628833Lactobacillus_gasseri_ATCC_33323--MKrSKIgV-aImafFItffaVGCsnsSSNsssNns---SDkYityMsQGKdAAsSQKY
28379563Lactobacillus_plantarum_WCFS1-MMKr---WM-WIVfavIIAvgVGsYsYtryrlQ------eDSYtAeMRtGErAlQeRnY
116334607Lactobacillus_brevis_ATCC_367--MKK---WV-WVVatiVVAllIGgYaYSNHHat------AkeYqAaManGRTAiQSKhY
116493439Pediococcus_pentosaceus_ATCC_25745--MKK---WI-WaVliFlVAgvVGgYavahyHeE------qvqYernitnGKTAidqtnY
 
28377801Lactobacillus_plantarum_WCFS1qkAltyFDNAlaqKpkDeKAqAYrdQtQaYltttsELKA-gKvkTALttvdKgvKitNGa
90962456Lactobacillus_salivarius_UCC118kkAElnlqDAlrkKpdDvvAKqrleQvKlYqEglaELKq-ddyeqAqltfRstaKvspsl
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842SqAadeFDqAyqaKaT-AQAKnYqAQAEnlaDsvKlaKtTvKyaSALnlaQKAqEqngGY
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SqAadeFDqAyqaKaT-AQAKnYqAQAEnlaDsvKlaKtTvKyaSALnlaQKAqEqngGY
42518239Lactobacillus_johnsonii_NCC_533etAEekFEDAhdvKsT-SEsKAYadQAgdmkDAqEEIRe-yeFkdALgeldKAanktNGY
116628833Lactobacillus_gasseri_ATCC_33323eaAEekFEDAhdvKaT-SEsKAYadQAgamkDAqEEIRe-yeFkdALgeldKAanktNGY
28379563Lactobacillus_plantarum_WCFS1TlAEtsFthAtrtKaSstEAqrYltQtQtYvagqEaLaA-rKFdvAkrdfmtvkttKHGa
116334607Lactobacillus_brevis_ATCC_367TqAEsyFqNAlkrrlnDApAqrYltQtQrFvsAenaLdd-lhFaSAqkhyQtvkDtKNGs
116493439Pediococcus_pentosaceus_ATCC_25745TaAKnyFsrAitirkdDqQAanllAQtKmYmrAssEfKS-neFtSArgdyQtvltyKkas
 
28377801Lactobacillus_plantarum_WCFS1TsLTnklKqLkvtVtsdyqey-QqLsddv-KAqlkvknGNY--SadvLkRcaainwdkkp
90962456Lactobacillus_salivarius_UCC118SILTqrAKKkdKflEsVlkqr-EkyddLyNeAvrltEmGaYsqSnenLvQILDgKnIdeK
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842SVmTsQAKKLvKqlKaVKDNyDsEIKPLLNKAAkamEdGyYdsaastyssILDlpyINGa
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SVmTsQAKKLvKqlKaVKDNyDsEIKPLLNKAAkamEdGDYdsaastyssILDlpyINGa
42518239Lactobacillus_johnsonii_NCC_533SVmTKQAsKLyKtIdKVQDhitnDInPLykKAklsyrdGDYqaavescDQILDlpyINsK
116628833Lactobacillus_gasseri_ATCC_33323SVmTKQAtKLyKtInKVQDhithDInPLykqAklsyrdGNYqatvescDQILDlsyINGK
28379563Lactobacillus_plantarum_WCFS1vtLinQAqeqltlIKKVQqkr-KtyqqqyqKAAelnkanEftdSnvvIaKlLqdKafkqR
116334607Lactobacillus_brevis_ATCC_367qVLTKrAqdrlKqVKtIRgNv-KqfKkLLtKAqgqnEalNYgqSntiLDElfnnskfrqR
116493439Pediococcus_pentosaceus_ATCC_25745AtLkqrsetkvKlIdKIKqNv-KkfnkkLtaAkqknEawDfygSnaiIDglLsdKefskE
 
28377801Lactobacillus_plantarum_WCFS1YlKplKakVKqLLaaAkkaktnmkVsAaeakraaalrrkiaaaknkwnmaalddvpdwfI
90962456Lactobacillus_salivarius_UCC118YYsQVRKdaReLqernNsiLeqirIq----------------------------------
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842YYaKVRsNVKdLLKeAksk-----------------------------------------
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365YYaKVRsNVKdLLKeAksk-----------------------------------------
42518239Lactobacillus_johnsonii_NCC_533YYKKVKKNVKhLrKvANAkLnsenVNdd-------------------------------I
116628833Lactobacillus_gasseri_ATCC_33323YYKKVKKNVKhLrKvANAkLngedVNdd-------------------------------I
28379563Lactobacillus_plantarum_WCFS1YYqdIRKNVldLqKqnNAsLktltgsAp-------------------------------v
116334607Lactobacillus_brevis_ATCC_367YYKnlysqalaLrKanNAgqta--------------------------------------
116493439Pediococcus_pentosaceus_ATCC_25745YYKtIydqalvLqrfnNAgIva--------------------------------------
 
28377801Lactobacillus_plantarum_WCFS1lalfADdsDvDDAaeelddeyadQAddNdDysdwdeqttdSnddTNdTdADSAdddwSdq
90962456Lactobacillus_salivarius_UCC118----------------------------------NqqaairrqreqqrqeEarkaqqaaa
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842----------------------------------qeDSSSSSeSSsSSSSDSSskSsSke
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365----------------------------------qeDSSSSSeSSsSSSSDSSskSsSke
42518239Lactobacillus_johnsonii_NCC_533dTenlDAnDdDEATTSnKqssnSKSSsSNssNtnNtsSnSnkSSSNSNSSnSqdnNaasq
116628833Lactobacillus_gasseri_ATCC_33323nTenlDAnDdDEATTShK----StSSkSNssNnsNtNtSSnSSqNNSNTAntqnnSaask
28379563Lactobacillus_plantarum_WCFS1ipsaAqAvtgmtgs--------qQqTqrtpatkqqaaaSSStSSANhSmgsSAaaNnSyg
116334607Lactobacillus_brevis_ATCC_367----------------------------------slaSSASSTAAaSSSesSAtsSstat
116493439Pediococcus_pentosaceus_ATCC_25745-----------------------------DqNsfNtDttpdnNeNsmeSgsSqqglpryg
 
28377801Lactobacillus_plantarum_WCFS1dtdSnddtdddSdtnsDAdsdSDySedDddedsNrddaddSEtqsddDYdddtdSESdDd
90962456Lactobacillus_salivarius_UCC118SSSSSaenqNdepKksDdkNddrnSgqDnvk-------------------NsseSkpetn
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842SSSSSSSda--SSsassSSNqaEgSgTsyndKVgGsTVT-----------SRdVqQiRtQ
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SSSSSSSaa--SSsassSSNqaEgSgTsyndKVgGsTVT-----------SRdVqQiRtQ
42518239Lactobacillus_johnsonii_NCC_533kSSAtSSssNtTAnnnnSntnSsstsSNdsmmINGQTVT-----------gRvISQTRNQ
116628833Lactobacillus_gasseri_ATCC_33323qSShttTsn---SnannSSNtnssSnSNsgmmIdGQTVT-----------gRvIaQTRNQ
28379563Lactobacillus_plantarum_WCFS1dSqvqtTraelTAQglDgSsySDaqirailqRaaaQhlslAQaaqtmNYsSdqIqaTRaE
116334607Lactobacillus_brevis_ATCC_367SSSSaSltsseqAaaknySgsnEytvTkkqkELNGKTIT-----------AdqIasaRkt
116493439Pediococcus_pentosaceus_ATCC_25745gpipSSTav--pdKtvpSkNnSskSvTkktaKsNaKe-------------SsssSaTeNs
 
28377801Lactobacillus_plantarum_WCFS1dydtddQyddddDydDaeSLLNpApvQpsvadrlFasasc--------
90962456Lactobacillus_salivarius_UCC118nsAaepQpNNenk-----------------------------------
104773417Lactobacillus_delbrueckii_bulgaricus_ATCC11842ldnlGesTAgWSp-QDLiNLfNyAyqQGHTTIDSiTKdDVEGylKSGK
116513403Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365ldnlGesTAgWSp-QDLiNLfNyAyqQGHTTIDSiTKdDVEGylKSGK
42518239Lactobacillus_johnsonii_NCC_533lsSiGvdTSSWSD-QkVvNfMrsAansGHTTIDSYTKQDVEnFk----
116628833Lactobacillus_gasseri_ATCC_33323lsSlGvdTSSWSD-QkVvNfMrsAannGHTTIDSYTKQDVEnFq----
28379563Lactobacillus_plantarum_WCFS1laqaGfnaSqYtD-aqIeaILqqAslQ-HmsLaqaars-lq-------
116334607Lactobacillus_brevis_ATCC_367inAaGvQadAmSD-QDVrvaLqqAnkk-dmsLsAYaKQylq-------
116493439Pediococcus_pentosaceus_ATCC_25745stkkneQTgSsSk-aEssktksrstenedipIsdtieE----------
 
Copyright © 2010 Miaomiao Zhou
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