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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG01920
Product for cluster alpha/beta hydrolase superfamily protein other product description for cluster
Functional class for cluster enzyme Subcellular location for cluster N-terminally anchored
Domains for cluster Alpha/beta hydrolase of unknown function (DUF915) Size of cluster 4


Proteins in cluster LaCOG01920
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01920 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01920
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116494198Lactobacillus_casei_ATCC_334MAKsAKRwRrVsIsVLvilLLAsG-GyWLWWQlGsRaIHQqtyrHTGIvTvFVPGygSNs
191637526Lactobacillus_casei_BL23MAKsAKRwRrVsIsVLvtfLLAsG-GyWLWWQlGsRaIHQqtyrHTGIvTvFVPGygSNs
116334383Lactobacillus_brevis_ATCC_367---MAhRrRltvllttIvvLL--GLctW--WnhrwsvlthvRVpqTttaTIFlPGssgrw
28379115Lactobacillus_plantarum_WCFS1---MmRRikiIkImaIIsatLvvGIGsy--WQhrltplrKtRVaqTsIpTIFVgGdyAra
 
116494198Lactobacillus_casei_ATCC_334LtfgpMVqRFKQdkASDqvtTIHVSadGKrTitGadrYNGKNPLInVvFADAksPQKEvR
191637526Lactobacillus_casei_BL23LtfgpMVqRFKQdkASDqvtTIHVSadGKrTitGadrYNGKNPLInVvFADAksPQKEvR
116334383Lactobacillus_brevis_ATCC_367LSlrsMVtslnRpHlAtfaLTaHVSfAGRvswQqrhairanNPLvpiIFkDntHPQrqAR
28379115Lactobacillus_plantarum_WCFS1fStdgfVhRltaaHlmtkgLvVHVShAGhvTvQqfgplk-nNPtIqVIFADnhHakrqAR
 
116494198Lactobacillus_casei_ATCC_334QLTgLLHwLrvQRHVTRVNLVGHSMGsNlsFnYmTTPHAnlQpQViNYVSFASEFyRdPT
191637526Lactobacillus_casei_BL23QLTdLLHwLrvQRHVTRVNLVGHSMGsNlsFnYmTTPHAnlQpQViNYVSFASEFyRdPT
116334383Lactobacillus_brevis_ATCC_367QLlvvLnqLhrryginhINVVGHSsGGtIiyDYLnn-rSqapvtVrriVtigaDFP--er
28379115Lactobacillus_plantarum_WCFS1QfatvmqgLakryHVTRyNaVGHSsGGNIiFDYLTa-qvpqRaQinkFVtigStyPgltT
 
116494198Lactobacillus_casei_ATCC_334TQIRALPKtLHILvIgGqVfgaKGDwaVSLAGVkRLAAkFkAAGlSttlfvYtGTPvGAy
191637526Lactobacillus_casei_BL23TQIRALPKtLHILvIgGqVfgaKGDwaVSLAGVkRLAAkFkAAGlSttlfvYtGTPvGAy
116334383Lactobacillus_brevis_ATCC_367TplRrvtpScNwLnlAGtigaldnDseVpvAtVtpLAhlvaqrGvhyhfrrYaGpvwntq
28379115Lactobacillus_plantarum_WCFS1qQlnrLPRSLpILnIAGhVwhtsGDggVNLqaVlKfshqllAAGwSpktqiihGSPltAs
 
116494198Lactobacillus_casei_ATCC_334HSTLHqNPyVDAeIlhFLFt--
191637526Lactobacillus_casei_BL23HSTLHqNPyVDAeIlRFLFt--
116334383Lactobacillus_brevis_ATCC_367HSlLHeNPalDAlIIRaLyppN
28379115Lactobacillus_plantarum_WCFS1HSmLHiNPqVDllIIqFLyg-N
 
Copyright © 2010 Miaomiao Zhou
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