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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG01903
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster Size of cluster 5


Proteins in cluster LaCOG01903
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01903 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01903
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116494847Lactobacillus_casei_ATCC_334MLLVVIELCIAKgLFGLMKIWKYTMVGLLAfVLAGCGQ-qLSTTKTSYgrDGLVAIVKGT
191638354Lactobacillus_casei_BL23MLLVVIELCIAKgLFGLMKIWKYTMVGLLAfVLAGCGQ-qLSTTKTSYgrDGLVAIVKGT
116334454Lactobacillus_brevis_ATCC_367---------mkKlLlsaL--------GLLALtLAGCsnnaLtTnKTdYhPtaLtAViKGd
28378959Lactobacillus_plantarum_WCFS1--------mfrKtamvav------taGaLtLLLAGCGkttLSTTKTTYkPnGLVAaVKGk
81428647Lactobacillus_sakei_23K---------mkKtvvGLv-----vsLGLvsL-LAGCGQakLtTsKTNYhqnGmVAVVKGT
 
116494847Lactobacillus_casei_ATCC_334ArgvDRVSYtsDaGk-gSVpVNSGTFVVnVPvSdvaQkVnLKAGS----mQTNVTVKAGQ
191638354Lactobacillus_casei_BL23ArgvDRVSYtsDaGk-gSVpVNSGTFVVnVPvSdvaQkVnLKAGS----mQTNVTVKAGQ
116334454Lactobacillus_brevis_ATCC_367AktK-tVhYRinnGATqtVnVkSGTyffQVPaSTktQTVKvsAGt----thktVTVhrvK
28378959Lactobacillus_plantarum_WCFS1sNvK-KVhYQlDgGqTktatVrnhTFVIQVPTkTtrQTVKiKAGS----dtTtVhVKgaK
81428647Lactobacillus_sakei_23KtNkKahlSYQiDqGAmhktsVreGTyVVQVPTtTkqQTVtLKAktgskaiEkkVTVaAGt
 
116494847Lactobacillus_casei_ATCC_334SLGtYstIAAKfNQMLavSsLPKADQAKLKQAQAaSAnAQKN------------------
191638354Lactobacillus_casei_BL23SLGtYstIAAKfNQMLavSsLPKADQAKLKQAQAaSAnAQKN------------------
116334454Lactobacillus_brevis_ATCC_367ALGnYRKlAAKYNQMtIaShLPakvQkqLqaAQknqAttQKklta---------------
28378959Lactobacillus_plantarum_WCFS1kLvgYQKmAttYNQaLIaSkLsKsDQqaaKKlQtegAalkKqqatiqakvkqaqaqikag
81428647Lactobacillus_sakei_23KAvGqYQaIAdKYNQavIgmaLsKADQAKaqslQkqAAaAk--------------------
 
116494847Lactobacillus_casei_ATCC_334------------vAtmSPTEk----MAMaQQAqQLKtlMAQAnANtKAsqLPAtA-KtGI
191638354Lactobacillus_casei_BL23------------AAtiSPTEk----MAMaQQAqQLKtlMAQAnANtKAsqLPstA-KtGI
116334454Lactobacillus_brevis_ATCC_367------------lAKTnPTaaaaaAqkqQaaAKQLqAkMAtAKkqaKdELLPtst-saGv
28378959Lactobacillus_plantarum_WCFS1gtaaatgaktlqAqQTAaaQlktkAasLQttqKQveAaMAtAKkqvKSQLLPtKtpsDGI
81428647Lactobacillus_sakei_23K------------AgQlAPaQl----MALQQtqKdvqAaMqQAKtakKAQLLPAKs-aDGv
 
116494847Lactobacillus_casei_ATCC_334HsILKsasgdyRasIvDGkAMGFAvvVPLsvLKNskkMqTFaTdFgLLTTSvGADAKsVF
191638354Lactobacillus_casei_BL23HsILKsasgdyRasIvDGkAMGFAvvVPLsvLKNskkMqTFaTdFgLLTTSvGADAKsVF
116334454Lactobacillus_brevis_ATCC_367kNlvaTkDvtIRgNvqnGqlMGlALItPtKqMKttAgkKqFGTtFALLgTSldAkpKyVi
28378959Lactobacillus_plantarum_WCFS1kNVLtTkDykIRlNvqkGDvlGaAMIVPtKafKNKtrqKnFGTaFALmTTtTGAnAKkVm
81428647Lactobacillus_sakei_23KHqlvKTdnvvIRgaIaDqDvMGltLIaPIKaLKdKAaLKeFGTsFALLaqSTGADsKkVm
 
116494847Lactobacillus_casei_ATCC_334SQFKKlTKDAKsKNNATTIsTIkSHGVKiDvGYSTtaLYlYvTK
191638354Lactobacillus_casei_BL23SQFKKlTKDAKsKNNATTIsTIkSHGVKiDvGYSTtaLYlYvTK
116334454Lactobacillus_brevis_ATCC_367kkFeKvlKDAKKKstSTTtKTIySnGVrFnTGFSTdhLYIYMTK
28378959Lactobacillus_plantarum_WCFS1kQFqKeTKD--nsgstTTIdpItSkGVrFtiGvSTSdLYIfMTK
81428647Lactobacillus_sakei_23KSeFsKfTKk-nKKsNqTTmKTItSnGVKFnTGFSaShLYIYiTK
 
Copyright © 2010 Miaomiao Zhou
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