LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

LACOG

LaCOG01788
Product for cluster	glycine betaine/carnitine/choline ABC transporter, substrate binding protein	other product description for cluster
Functional class for cluster	transport	Subcellular location for cluster	Lipid anchored
Domains for cluster	Substrate binding domain of ABC-type glycine betaine transport system	Size of cluster	7

Proteins in cluster LaCOG01788
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color legend:

Corrected sequence

Pseudo gene

Domain structure of LaCOG01788 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment for LaCOG01788
Color legend:		Corrected sequence		Pseudo gene		Gene made from mutiple pseudogenes


29375451	Enterococcus_faecalis_V583	---mMKKkLklsLLflssLLLLaGCslPGLastsDDnTVaItggiTsEaQIlgSIvADmv
81428233	Lactobacillus_sakei_23K	MLKrLKKitvltLLggc-LLLLGsCGlPGLGGSakD-TiRIsSQSTTEsQIlANIvsqLI
116493636	Lactobacillus_casei_ATCC_334	-MKtfrKmLlsLfLip--VLLLGGCGFPGLGGSGNDGTVRIASQtsTEsQIMANIIAELI
191636888	Lactobacillus_casei_BL23	-MKtfrKmLlsLfLip--VLLLGGCGFPGLGGSGNDGTVRIASQtsTEsQIMANIIAELI
116493381	Pediococcus_pentosaceus_ATCC_25745	---mLKrfLklILplgalavvLsGCGwPGLGGttgn-TVkIAaQNTTEQQvMsSVIqqLI
116332963	Lactobacillus_brevis_ATCC_367	MrKhLrKwLagLLaavi-LLpLGGCslPGLaGSGND-TiRIASQNTTEQQIMAymIAgmI
28378309	Lactobacillus_plantarum_WCFS1	-MKkIKKwLlgVfatvasaLLLaGCGFPGLsGtsSD-TiRIASQNTTEQQIMAymIqDmI

29375451	Enterococcus_faecalis_V583	EHyTdkKTnVINNLattTinHQAMlnGDAsISAaRYTGTDVTTTLGlpaeKDPkK-Afnl
81428233	Lactobacillus_sakei_23K	aHETdnKvelvNNLGSsTVtHesLiRGDADIatsRYaGTeITgTLkmKptKDPkK-Aqti
116493636	Lactobacillus_casei_ATCC_334	nHElgyKTTlvNNLGSGTVvHQAMiRnDADISAtRYTGTDITgTLGmnpvKDPae-AtAi
191636888	Lactobacillus_casei_BL23	nHElgyKTTlvNNLGSGTVvHQAMiRnDADISAtRYTGTDITgTLGmnpvKDPae-AtAi
116493381	Pediococcus_pentosaceus_ATCC_25745	EHDTNlnaeIINNLGSGTVsfQAqkRGeADltAVRfsGTDyqTiLngpqgrtPeq-vnAy
116332963	Lactobacillus_brevis_ATCC_367	EHDTNlKTSIINNLGSGnVsfnALknGnADISAIRfyGTDLTTiLneKferDPaK-vkAt
28378309	Lactobacillus_plantarum_WCFS1	KHysNlnTTIINNLGSGTVsfnALkndqADISAIRYTGTDLTTiLGeKmdrsniKsidqk

29375451	Enterococcus_faecalis_V583	VqsEFeKRYqQTWFPSYGFenTYvFlVTkEtAeKYnLKTVSDLgKVAdKLvAGVDtaWIt
81428233	Lactobacillus_sakei_23K	VKREFKdRYqQTWFPtYGFADTYAFMVTQKmAKKYHLETVSDLgrVAkqLtAGVDsvWVN
116493636	Lactobacillus_casei_ATCC_334	VKREFKKRYDQTWyPSYGFsDTYAFMVTQQeAKKdgLsTiSDLKKVASRynAGVDssWMN
191636888	Lactobacillus_casei_BL23	VKREFKKRYDQTWyPSYGFsDTYAFMVTQQeAKKdgLsTiSDLKKVASRynAGVDssWMN
116493381	Pediococcus_pentosaceus_ATCC_25745	VKKEFnRRYDmTyFPtYGFADTfqFMVTQdyAKKHHLEnVSDLKKIsSdMkvGIDQtWLs
116332963	Lactobacillus_brevis_ATCC_367	VtKgFqdRYhmTyFktYGFADTYAwMVTQKyAKqHHLKTVSDmKKlApKMkvGIDQiWqN
28378309	Lactobacillus_plantarum_WCFS1	VRsqFnskYqmTyFPSYGFADTYAFMVTkatAKKYHLnTVSDmKKVASKLtvGlDQiWte

29375451	Enterococcus_faecalis_V583	ReGDGYegFKKeYnFqFKsIlPMQIGLVYDAvnAGKMDviLGYSTDGRIgSYdLvmLKDD
81428233	Lactobacillus_sakei_23K	heGDGYqEFKqtYGyDFKKVaPMQIGLVYsALaAGKMDvVLGYSTDGRIKSYNLKVLKDD
116493636	Lactobacillus_casei_ATCC_334	RKGDGYsDFtKmYGFDFKRVYPMQIGLVYDAvEAnKMqTVLGYSTDGRIRSYNLKVLKDD
191636888	Lactobacillus_casei_BL23	RKGDGYsDFtKmYGFDFKRVYPMQIGLVYDAvEAnKMqTVLGYSTDGRIRSYNLKVLKDD
116493381	Pediococcus_pentosaceus_ATCC_25745	RKGDGYaDFKKrYGysFgnIYPMQIGLVYnALashKMDTVLGYSTDGRIRSYNLKlLKDD
116332963	Lactobacillus_brevis_ATCC_367	RqGDGYpsFqKmYGysFgtVYPMQtGLlYDALsAnKMDaiLGYSTDGRvaSYhLKlLKDD
28378309	Lactobacillus_plantarum_WCFS1	RKGDGYpaFKKlYGFqFgKtYPMQIGLVYDALEsGKMDaiLGYSTDGRIgSYdLKILKDD

29375451	Enterococcus_faecalis_V583	KrFFPPYDAapVVsdKLLKetPEiKdvLnRLDGKIStKkMQELNYQaDNDLiEPaVVAeR
81428233	Lactobacillus_sakei_23K	rHFFPPYDASlVatdQILKqHPELKPLLnRLsGqInLdTMQtLNYkVDNDLlEPaVVAKq
116493636	Lactobacillus_casei_ATCC_334	KkFFPPYqcSlVVNNsfLKKyPkLKPLLHRLDGKInLKTMQELNYQVDdqLlEPnVVAqK
191636888	Lactobacillus_casei_BL23	KkFFPPYqcSlVVNNsfLKKyPkLKPLLHRLDGKInLKTMQELNYQVDdqLlEPnVVAqK
116493381	Pediococcus_pentosaceus_ATCC_25745	KnyFPPYnASvVVNNKsLKKyPELKrvLHkLDGKISLqTMQELNYQVDNnLkEPsVVAKe
116332963	Lactobacillus_brevis_ATCC_367	KHFFPPYDASpVatNaILKKHPELKPvLekLeGKISLKTMQELNYkVDdELeEPqtVAmn
28378309	Lactobacillus_plantarum_WCFS1	KnFFPPYnASaVatNKILKaHPkLKPiLnRLnGKISLKTMQnLNYQVDNnLvEPeVVAKq

29375451	Enterococcus_faecalis_V583	FLkenNYF-EGe--
81428233	Lactobacillus_sakei_23K	FLtqHdYFkkGAnk
116493636	Lactobacillus_casei_ATCC_334	FLAKHNYF-kGSDD
191636888	Lactobacillus_casei_BL23	FLAKHNYF-kGSDD
116493381	Pediococcus_pentosaceus_ATCC_25745	FLeKnhYF-EGgnn
116332963	Lactobacillus_brevis_ATCC_367	yLkqHhYF-EGgnn
28378309	Lactobacillus_plantarum_WCFS1	FLeKHNYF-EGSDk