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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG01780
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster N-terminally anchored
Domains for cluster Peptidase propeptide and YPEB domain Size of cluster 10


Proteins in cluster LaCOG01780
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01780 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01780
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
28378250Lactobacillus_plantarum_WCFS1---MmsKkygIgLalltvvLlAGcgtqqstqNkaTSQstsSqsnstksvtak--------
81427858Lactobacillus_sakei_23K-----mKkspLLIglltIaLlAGcSnqqakqtaSTkKattvkqQTpTKlQ----------
58337925Lactobacillus_acidophilus_NCFM-------MkrfLtfilsIfagiaigiaishaNqeTrKtsnvTvhvgdflnkTqavsysTd
116618068Leuconostoc_mesenteroides_ATCC_8293-MlkKwlttvLLIiitLLlvtiayllysnhNNinTSRstdSSfdTsSssKSSsnnd----
29377512Enterococcus_faecalis_V583---MKkiLygaLtgfALf-LvAGcTpktptavsSTNEqKETAisTsetssSvqqeattTs
58337920Lactobacillus_acidophilus_NCFM---MKlKLasLtLlsvaL-IatacSnndnsttqSsrtiEnSkksTvTEkRSSvasNqvqs
42518141Lactobacillus_johnsonii_NCC_533mMsknnKItrLLaatAVIgI-iGtSaaacsNNdSsNQsKQSSvKkeTKdKkSnteNalkK
116628734Lactobacillus_gasseri_ATCC_33323---MKrKIskLLaatALMga-lGiSvvacgNNdSTSKtKQSSvKktaKdKaSntkNatrK
42519060Lactobacillus_johnsonii_NCC_533---MRtnIkrLsLgaAVLgLalGgTsltliNqaqaStggQATeQTqTsns----------
58337919Lactobacillus_acidophilus_NCFM--mkainLkkIIIasAaL-IglGaAaittiNqaepTtvQaATgK----------------
 
28378250Lactobacillus_plantarum_WCFS1-----tKvSlAaAIkKFqQqYPdAsvtSIELedqlgRpVYtlEGvggTqEhELqlNgrTG
81427858Lactobacillus_sakei_23K-----pKvSleKArelFkQqYPNAdIselqLKkqlNKtVYhltGlsdTeElEMqIdsQTG
58337925Lactobacillus_acidophilus_NCFMklpt-IRvnQAsAIrKFkslYsNAvIKSIsLtlnkDiYVYnIiGFDdrKdcmiqvdAtnn
116618068Leuconostoc_mesenteroides_ATCC_8293-----dlLSlAKirSiFyKRYPNAaItSIELeknllsthYDItGvDdntEYtLKIhADTG
29377512Enterococcus_faecalis_V583ektsaVavSleKvttaFEKKYPeAKItSlqLdtDfgRYfYEIEGvDqqKEYQvevNAETG
58337920Lactobacillus_acidophilus_NCFMSvnk-IKLSQqEAIDKFhnqfnNkKIhSIDLKlEgSqYIYEIEGFDtThkYsaeINAETG
42518141Lactobacillus_johnsonii_NCC_533Sq---IKLSQtEALNKFDEKYsdkEIKeINLKlDgNRYVYEIDGFDkSKEYEMtINArTG
116628734Lactobacillus_gasseri_ATCC_33323Sq---IKLSQtEAINKFDKKYsdkKlKeIDLKlDgNKYlYEItGFDkdKEYEMtINAtsG
42519060Lactobacillus_johnsonii_NCC_533-----InLSQSDAINKFNEKYgsksIKeIgLKnkkNKYIYEvEGFDseKEYkvKIdAssG
58337919Lactobacillus_acidophilus_NCFM-----IKvSQSsAVkKFqaKY-NAKIKSINLekEngRYVYEIEGFssTREYEMKINAssG
 
28378250Lactobacillus_plantarum_WCFS1KvIskqSEmLDqDDQada--egDrLnLNKvISpSKAvaIAihdrnGGyAsElKLdKDNGt
81427858Lactobacillus_sakei_23KdishlTkEtLDtDEQhGVArqkErfDfkslmtleaAqKkAQhyfdG-dvlEatLEKDDGv
58337925Lactobacillus_acidophilus_NCFMKiIgqStqvLnyDfd-----kEsyLnLNKTISRSEASEIAtKefnnetpisWKLEdvNdq
116618068Leuconostoc_mesenteroides_ATCC_8293KvIthNkEqLDaDEknGtAknnEaiafdniISldsAvnkAKdaagdGslngWsLEKDDGr
29377512Enterococcus_faecalis_V583eftKekvEtLDaDEQnGVkmqEEaLDLtniISReQATtLAEKaaKvGqAtDWKLEKelGi
58337920Lactobacillus_acidophilus_NCFMhassvhSEkLehDDQd----dQQeLnLNgvISRdEAStIAEEhaKG-tSrEWnLEQehGk
42518141Lactobacillus_johnsonii_NCC_533KeIKsSSEkLDlDEh-----lQkgLDLdKTISRkEASEIAEKevKnsvAkEWdLkmeDGk
116628734Lactobacillus_gasseri_ATCC_33323KeVKsSSEkLDlDEr-----lQkgLDLdKvISRdQASEIAEKevKnstAkEWtLkmDqdk
42519060Lactobacillus_johnsonii_NCC_533KiLKakSEnLDaDDk------EEaLDLNglISRSEATKLAQtkasG-kAvkWsLEmDDqq
58337919Lactobacillus_acidophilus_NCFMKtIsshSEkLeagyk------kaaLnLNKTISRStATKIAQKrvsGskAiEWnLEReNsr
 
28378250Lactobacillus_plantarum_WCFS1TYWEVQVhqGkQqvdiKIDAyeghilETEhDD-------------------
81427858Lactobacillus_sakei_23KvYWEiEghqkhQKmqVKIDAttgeVVDTElDD-------------------
58337925Lactobacillus_acidophilus_NCFMaiWkivlirneQKrEiKInAetKell-------------------------
116618068Leuconostoc_mesenteroides_ATCC_8293TYWEislkDGnnnvaVKlDAnSgqVIEkdeDD-------------------
29377512Enterococcus_faecalis_V583TYWEVKVkEGqQKiEVKIDAhSgKiltTErDD-------------------
58337920Lactobacillus_acidophilus_NCFMTYWnVEVgEryhssEVKIDAhSKKVIsvEnDD-------------------
42518141Lactobacillus_johnsonii_NCC_533aiWEVtVesGstKhEVeIDAsSKKVIrSEeen-------------------
116628734Lactobacillus_gasseri_ATCC_33323aiWdVtVesGssKhEVeIDAiSKKVIKSEkDD-------------------
42519060Lactobacillus_johnsonii_NCC_533pvWkVElkDGnKetEVKIDAkSQKilKTktDedkkdsekkdqvdhkensfs
58337919Lactobacillus_acidophilus_NCFMSvWEVtVtkngKKsdVKInAltKKiIsvErD--------------------
 
Copyright © 2010 Miaomiao Zhou
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