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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG01715
Product for cluster FMN-binding protein other product description for cluster hypothetical protein
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster FMN-binding domain Size of cluster 5


Proteins in cluster LaCOG01715
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01715 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01715
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116491111Oenococcus_oeni_PSU-1MKtSKtlks---iALtsaVfmslGSftvaapavfpnts-----vtAsaaKtAKQtAGkkL
28377865Lactobacillus_plantarum_WCFS1MKfksVITGasVVAiSALaLAgCGSSSSSSssSSSkKsSSSS-ssAKttKvAKltAGskm
29377699Enterococcus_faecalis_V583MKvnKfVkGfAaiALSsLVLAACGadkkdnttNSSSaASSeTkKstesSapAKKVAGGdL
116495748Lactobacillus_casei_ATCC_334MKlSKVVTGtAVVALSALVLSACGSSSSSSkkSTSSKASSS--KvvKKSssqKQVAGGaL
191639235Lactobacillus_casei_BL23MKlSKVVTGtAVVALSALVLSACGSSSSSSknSTSSKASSS--KvvKKSssqKQVAGGaL
 
116491111Oenococcus_oeni_PSU-1KnGTYKLaEqdYynGYRVvMSMkVKn-nKIvSnKYDYVNKkGKSKTDDAAYEKAMKkanG
28377865Lactobacillus_plantarum_WCFS1KaGTYnLEEenYsHGYRtkMSiTVnnnGKITkSsYDqVNKnGKSKvDDtsYnKqMKkiaG
29377699Enterococcus_faecalis_V583KDGTYKLEEkneknGYRavfeMTVKD-GKITeSKYDniNaDGKSKTEDtkYEesMKAksG
116495748Lactobacillus_casei_ATCC_334KDGTYKLDETGYdHGYkVqMAMTVKD-GKITStKYDYVdKDGKSKTkDAAYEKAMKAkvk
191639235Lactobacillus_casei_BL23KDGTYKLDETGYdHGYkVqMAMTVKD-GKITStKYDYVdKDGKSKTkDAAYEKAMKAkak
 
116491111Oenococcus_oeni_PSU-1VGPKEYIPkLNeeli------------------------KaYg-----------------
28377865Lactobacillus_plantarum_WCFS1tnPKtYmPkLNKtltgSaatgNVGsIDVvtGATESSkTFqNYtQQLvQAAQAGnksTIkI
29377699Enterococcus_faecalis_V583VGPKEYIkQLNdSFvKaqs--asG-veVvtGAThSSesFqNYAQQLIQAAQAGnTdTIEI
116495748Lactobacillus_casei_ATCC_334VGPKEYIPELNKSFqKNgT--NVGAIDVISGATDSSmTFKNYAQQLIQAAQAGDTKTIEv
191639235Lactobacillus_casei_BL23VGPKEYIPELNKSFqKNgT--NVGAIDVISGATDSSmTFKNYAQQLIQAAQAGDTKTIEv
 
116491111Oenococcus_oeni_PSU-1------------------------------------------------------------
28377865Lactobacillus_plantarum_WCFS1DNGAKMKDGTYkLnEKNYshGYKVTFaITVKDnKITkSeYnqvNKnGKSKvdDaaYnkqM
29377699Enterococcus_faecalis_V583DNGAtlKDGTYSLkEKNdsNGYhtTFSmTVKDGKvTESNYDNvNaDGKSKkdDTEYESkM
116495748Lactobacillus_casei_ATCC_334nNtgKMqDGTYTLEEKNYFNGYRVTFSITVKDGKITESNYDNINKDGKSKtlDTKYEANM
191639235Lactobacillus_casei_BL23nNtgKMqDGTYTLEEKNYFNGYRVaFSITVKDGKITESNYDNINKDGKSKtlDTKYEANM
 
116491111Oenococcus_oeni_PSU-1-------------------------SKEpsAvVDtVSGATeSSnlFviYAqQLINrAQaG
28377865Lactobacillus_plantarum_WCFS1KKVAKtnPKtYqPaLNKSLV-----kssdPtkVDVVtGATeSSnTFImYAEQLqNAAQKG
29377699Enterococcus_faecalis_V583KdVAgVGPKEYIetLNKefVkamgeedgSPAgVeVVtGATHSthsFInYAqQLVNAAeKG
116495748Lactobacillus_casei_ATCC_334KKVnKVGPKEYIPeLNKSLV-----AKQSPAkVDVVSGATHSSDTFIlYADQLVNAAQnG
191639235Lactobacillus_casei_BL23KKVnKVGPKEYIPeLNKSLV-----AKQSPAkVDVVSGATHSSDTFIlYADQLVNAAQnG
 
116491111Oenococcus_oeni_PSU-1NhktvkisNIiYsd
28377865Lactobacillus_plantarum_WCFS1dTNtItVDNmiFse
29377699Enterococcus_faecalis_V583dTtEIvVDNIVtk-
116495748Lactobacillus_casei_ATCC_334NTNKIeVDNIVYNN
191639235Lactobacillus_casei_BL23NTNKIeVDNIVYNN
 
Copyright © 2010 Miaomiao Zhou
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