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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG01397
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster Size of cluster 3


Proteins in cluster LaCOG01397
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01397 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01397
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
15674067Lactococcus_lactis_lactis_IL1403MeKtSANIKKFVvISLItLGTLTVLtACGSKESKKSEQSSfSSSI-NNkSsQSSSSSnSs
116513040Lactococcus_lactis_cremoris_SK11MKKISANIKKFVgISLILLGTLTVLSACGSKESKKSEQSSsSSSIKNNESiQSSSSSSST
125625129_125625128Lactococcus_lactis_cremoris_MG1363MKKISANIKKFVgISLILLGTLpiLSACGSKESKKSEQSSsSSSIKNNESiQSSSSSSST
 
15674067Lactococcus_lactis_lactis_IL1403StS---SSSStQEGFGdvpQILSGNYSSLNGTWQTADGSTKIILnNGNIIFSpDYeRIIS
116513040Lactococcus_lactis_cremoris_SK11SSS--NSSSSSQEGFGNsSQILSGNYSSLNGTWQTADGTSKIILkNGNIIFSsEYvRIIS
125625129_125625128Lactococcus_lactis_cremoris_MG1363SSSssNSSSSSQEGFGNsSQILSGNYSSLNGTW---------------------xmRIIS
 
15674067Lactococcus_lactis_lactis_IL1403NPvAKDGIvIgDALNDKRHMGFMFAAAhNSPIFPNSSNvDKTDSGKDRLIITTDEEGIEI
116513040Lactococcus_lactis_cremoris_SK11NPIAKDGIIIADALNDKRHMGFMFAAAYNSPIFPNSSNLDKTDSGKDRLIITTDEEGIEI
125625129_125625128Lactococcus_lactis_cremoris_MG1363NPIAKDGIIIADALNDKRHMGFMFAAAYNSPIFPNSSNLDKTDSGKDRLIITTDEEGIEI
 
15674067Lactococcus_lactis_lactis_IL1403FDTMPTaFfYKVSNDiTl---
116513040Lactococcus_lactis_cremoris_SK11FDTMPTSFYYKVSNDTTsLSS
125625129_125625128Lactococcus_lactis_cremoris_MG1363FDTMPTSFYYKVSNDTTgLSS
 
Copyright © 2010 Miaomiao Zhou
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