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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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LACOG


LaCOG01373
Product for cluster amino acid ABC transporter substrate binding protein other product description for cluster
Functional class for cluster transport Subcellular location for cluster Lipid anchored
Domains for cluster Bacterial extracellular solute-binding proteins, family 3 Size of cluster 4


Proteins in cluster LaCOG01373
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01373 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01373
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
15674033Lactococcus_lactis_lactis_IL1403-MKKikLLTLATVGIASIGLLAACSSKDNSSSKSTDKVTTVTVAtSAASVPYE-YSENGK
116513001Lactococcus_lactis_cremoris_SK11-MKKikLLTLATLGIASIGLLAACSSKDNSSSKSTDKVTTVTVAtSAASVPYE-YSENGK
125625091Lactococcus_lactis_cremoris_MG1363-MKKikLLTLATLGIASIGLLAACSSKDNSSSKSTDKVTTVTVAtSAASVPYE-YSENGK
116617288Leuconostoc_mesenteroides_ATCC_8293MvnKkgiITaAvavViigGgLtirhlnadSnkaaakKVrTinVAhTqnyVPYD-YvKNGv
191637273Lactobacillus_casei_BL23-MKKsrLalIAgtaVlaL-fLASCgksgtaSStSssKVkTVqivgpSASqPYQiYkskdK
184155295Lactobacillus_fermentum_IFO_3956MklKniiLTfAvtGlASLGLattshA-----------aTTVTVAapngnsvYv-tNtdkg
 
15674033Lactococcus_lactis_lactis_IL1403MTGFEyDILKAADKDmKD-YKFDFKVyEDSAILAALDGGrAqIAANNFGKTKARSEKYlF
116513001Lactococcus_lactis_cremoris_SK11MTGFEyDILKAADKDmKD-YKFEFKVyEDSAILAALDGGrAqIAANNFGKTKARSEKYlF
125625091Lactococcus_lactis_cremoris_MG1363MTGFEyDILKAADKDmKD-YKFEFKVyEDSAILAALDGGrAqIAANNFGKTKARSEKYlF
116617288Leuconostoc_mesenteroides_ATCC_8293skGyEvDVLKAvDKlLpD-YKFkYhpTsDedlLvgLDsGKyDVgvkgawwTKeRAkKYil
191637273Lactobacillus_casei_BL23LsGyngDILaAiqKDLKnkYKFQYQVTEansVfvgLqsGKyDlAvgNYyysteRAktYdY
184155295Lactobacillus_fermentum_IFO_3956psGylgaliKkiDqDLpq-YKFkttfTsqnAVfAgLqsGKyDVAlNNswynKeRfanYyh
 
15674033Lactococcus_lactis_lactis_IL1403SY-PV-rQGIdaIFsTSKENITKIsQLAGKTtEI----PAGtNYGDMFESWNKNHPDKKI
116513001Lactococcus_lactis_cremoris_SK11SY-PV-rQGIdaIFsTSKENITKIsQLAGKTtEI----PAGtNYGDMFESWNKNHPDKKI
125625091Lactococcus_lactis_cremoris_MG1363SY-PV-rQGIdaIFsTSKENITKIsQLAGKTtEI----PAGtNYGDMFESWNKNHPDKKI
116617288Leuconostoc_mesenteroides_ATCC_8293pk-qavgasIigItyrkdDNyksfAefAkKsgklvPISPqngqYa-vvqeWNKkHPneKI
191637273Lactobacillus_casei_BL23SrnPtllsdlrlvvrkddnkITdLAsLAktngklePIdvAdprYG-ivEnWNKqHPEqKv
184155295Lactobacillus_fermentum_IFO_3956tr-aIglddlrlvYrkggksansLAevAkKnlklvPvStddarYs-viEnyNKsHPknKI
 
15674033Lactococcus_lactis_lactis_IL1403nvKYS-QrPLADRLSaISSGQIDFLFasKAPAENLIKeHAITGlVDTvPtDLdKQpEFKT
116513001Lactococcus_lactis_cremoris_SK11DvKYS-QrPLADRLSaIASGQIDFLFasKAPAENLIRqHAITGlVDTvPtDLNKQsEFKT
125625091Lactococcus_lactis_cremoris_MG1363DvKYS-QrPLADRLSaIASGQIDFLFasKAPAENLIRqHAITGlVDTvPtDLNKQsEFKT
116617288Leuconostoc_mesenteroides_ATCC_8293tLKsadQftVgDaynwvleGryDayFdvKvnyQNsVvKssgayhssadkLaytpykgiKT
191637273Lactobacillus_casei_BL23tLKsSGfvdtAnQfkdIvnkQyDaIlypRtnfDtaqKKl-------nePLkLsKsiavfp
184155295Lactobacillus_fermentum_IFO_3956nLKaiGdqssADaLkevAdGQyDvaiypypsykq------IantaegkkLtvsKsigqes
 
15674033Lactococcus_lactis_lactis_IL1403YdYFIlDNSQ-sKLQKDLNvELKKLYDNGTLKKLSEqYFHDShI-----PAADQFK----
116513001Lactococcus_lactis_cremoris_SK11YdYFIlDNSQ-TKLQKDLNaELKKLYENGTLKeLSEKYFHDShI-----PAADQFK----
125625091Lactococcus_lactis_cremoris_MG1363YdYFIlDNSQ-TKLQKDLNaELKKLYENGTLKeLSEKYFHDShI-----PAADQFK----
116617288Leuconostoc_mesenteroides_ATCC_8293YpiisraNkdNsnfsKEydqaiKKLqkNGTLeKLSqKYFkenvw----dfvgDk------
191637273Lactobacillus_casei_BL23vvYYyhksStsTqLRKDIdkELlKLrkNGTLaKLSqKwlgsdpftakndrvtDvtKSyaq
184155295Lactobacillus_fermentum_IFO_3956pyllLyksaKNkKLtevLNkEiKKLYEdGyLqKLtkKYlYedtf---klPgAkknyNaef
 
15674033Lactococcus_lactis_lactis_IL1403--
116513001Lactococcus_lactis_cremoris_SK11--
125625091Lactococcus_lactis_cremoris_MG1363--
116617288Leuconostoc_mesenteroides_ATCC_8293--
191637273Lactobacillus_casei_BL23eK
184155295Lactobacillus_fermentum_IFO_3956nK
 
Copyright © 2010 Miaomiao Zhou
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