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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG


LaCOG01216
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster Lipid anchored
Domains for cluster Size of cluster 4


Proteins in cluster LaCOG01216
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01216 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01216
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
15673809Lactococcus_lactis_lactis_IL1403MKKILITTTLALALLSLGACSKKSDashKsSSSstSsfsfpsstSSSSkvSSSsKVEtpt
116512704_116512706Lactococcus_lactis_cremoris_SK11MKKILIsTTLALALLSLGACSKKSDSKaKASSSvSST-----AISSSSSTSSSKKVENnQ
125624791Lactococcus_lactis_cremoris_MG1363MKKILITTTLALALLSLGACSKKSDSKaKASSSvSST-----AISSSSSTSSSKKVENtQ
 
15673809Lactococcus_lactis_lactis_IL1403gNIdSSFQkaVdATQptvaTmKetyKDTYSDItaTAEAPqTIVYTYtYRNQITPTatKEa
116512704_116512706Lactococcus_lactis_cremoris_SK11ENISSSFQMTVEATQKNMETTKaSFKDTYSDIKVTAEAPETIVYTY--------Triasx
125624791Lactococcus_lactis_cremoris_MG1363ENISSSFQMTVEATQKNMETTKvSFKDTYSDIKVTAEAPETIVYTYiYKNKVTPTvsKEe
 
15673809Lactococcus_lactis_lactis_IL1403vakQLAtaTAsEFNqFsavfPNFKERYIYLNsDkSElyNiLvTkeDvtAAqaSSaSssk
116512704_116512706Lactococcus_lactis_cremoris_SK11MINQLALGTAAEFNRFTSIYPNFKERYIYLNPDNSEIFNLLITQNDIDAASSSSdSE--
125624791Lactococcus_lactis_cremoris_MG1363MINQLALGTAAEFNRFTSIYPNFKERYIYLNPDNSEIFNLLITQNDIDAvSSSSaSE--
 
Copyright © 2010 Miaomiao Zhou
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