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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG

LaCOG01072
Product for cluster ABC-type sugar transport system, periplasmic component other product description for cluster D-ribose-binding protein
Functional class for cluster transport Subcellular location for cluster Lipid anchored
Domains for cluster Periplasmic binding proteins and sugar binding domain of the LacI family Size of cluster 8


Proteins in cluster LaCOG01072
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG01072 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG01072
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


15673617Lactococcus_lactis_lactis_IL1403--MKLvKkLt---FAfVATLAVsT---LTACsLyTGipgRdgkEKVEeVTHKkPnELnIG


116512498Lactococcus_lactis_cremoris_SK11--MKLvKkLt---FAlVATLAVsT---LTACsLyTGipgRdgkEKVEeVaHKkanELnIG


125623640Lactococcus_lactis_cremoris_MG1363--MKLvKkLt---FAlVATLAVsT---LTACsLyTGipgRdgkEKVEeVaHKkanELnIG


58337747Lactobacillus_acidophilus_NCFM--MnfkrFLk---ittVAsIlVlaggiLggCG-sTGLsngSgss--DKVTkKAPKnLKIG


116493878Lactobacillus_casei_ATCC_334MKqsLkrFLm---vAvVATaAlFT---LTACG-gTGLssKSdsn--tKVTkKAPKDLKVG


191637143Lactobacillus_casei_BL23MKqsLkrFLm---vAvVtTaAlFT---LTACG-gTGLssKSdsn--tKVTkKAPKDLKVG


42519534Lactobacillus_johnsonii_NCC_533-----mrkif---iisriifpIFv------iGiiiyLfyaqpfs---------hKpiKfG


90961073Lactobacillus_salivarius_UCC118MKyKLtKFikkkdFvrlisIAIFl------lGiilvvwisSfympfvK------qpvKIG


 


15673617Lactococcus_lactis_lactis_IL1403VSISTtNNPYFVSMNNaIKSMAKEKNTKLtVSDAQNDSAtQlNNvqnFISQnVDAILINP


116512498Lactococcus_lactis_cremoris_SK11VSISTMNNPYFVSMNNaIKSMAKEKNTKLtVSDAQNDSAtQlNNvqnFISQnVDAILINP


125623640Lactococcus_lactis_cremoris_MG1363VSISTtNNPYFVSMNNaIKSMAKEKNTKLtVSDAQNDSAtQlNNvqnFISQnVDAILINP


58337747Lactobacillus_acidophilus_NCFMVSVSTLtNPaFVnlkNvIsnyAKkhgsKviVdDAnNDTsKQnNdvEDlITQRVDAliINP


116493878Lactobacillus_casei_ATCC_334VSLSTLsNPFFVSvrNgIqdLAKknkTnvqVSDAQNDTAKQnsNIEDlIqkKVDvliINP


191637143Lactobacillus_casei_BL23VSLSTLsNPFFVSvrNgIqdLAKknkTnvqVSDAQNDTAKQnsNIEDlIqkKVDvliINP


42519534Lactobacillus_johnsonii_NCC_533stymTMNNdFyqtlNepIanevdDhNdlLynrnpElsvnnQiteIEnFIkngVkvIfINP


90961073Lactobacillus_salivarius_UCC118stymTLNNsFyktiNeevKkqvsQngdiLytrDpglsvsKQcqqIyDFIdkKVDvILINP


 


15673617Lactococcus_lactis_lactis_IL1403VDSDA--IVPAIKaANnAhIPVIAmDRGSnGG--tVLTTVASDNVAAGKMAAqaveKlvG


116512498Lactococcus_lactis_cremoris_SK11VDyDA--IVsAIKaANnAhIPVIAmDRGAnGG--tVLTTVASDNVAAGKMAAqaveKlvG


125623640Lactococcus_lactis_cremoris_MG1363VDSDA--IVPAIKavNnAhIPVIAmDRGAnGG--tVLTTVASDNVAAGKMAAqaveKlvG


58337747Lactobacillus_acidophilus_NCFMcDSsA--IsavVKkANEAnIPVvcVDRsADsG--kVIsTVASDNVAgGKMAAnwlvKtLG


116493878Lactobacillus_casei_ATCC_334VDSsA--ItPAVKdANDAGIPVItVDRsSDGG--kVLTlVASnstkgGQMAAKyMiekLG


191637143Lactobacillus_casei_BL23VDSsA--ItPAVKdANDAGIPVItVDRsSDGG--kVLTlVASnstkgGQMAAKyMiekLG


42519534Lactobacillus_johnsonii_NCC_533VDgnspRlIrvlKkAhqmGIkiIvVDsqlkdsnNyVdcTVrSnNyqAGvlcAKelmar-q


90961073Lactobacillus_salivarius_UCC118VngEskQIqhAlKiAhDkGIkivvVDsqlsns-SfVnanVvSDNfkAGvldAKyMmKs-s


 


15673617Lactococcus_lactis_lactis_IL1403KNvKvLELsGtPGASATidRGKGFnSEAKt-lGLnILSsQSAnFDRttGLNTTQNmLQsH


116512498Lactococcus_lactis_cremoris_SK11KNvKvLELsGtPGASATidRGKGFnSEAKt-lGLnILSsQSAnFyRttGLNTTQNmLQsH


125623640Lactococcus_lactis_cremoris_MG1363KNvKvLELsGtPGASATidRGKGFnnEAKt-lGLnILSsQSAnFDRttGLNTTQNmLQsH


58337747Lactobacillus_acidophilus_NCFMeNAKvaEiQGiPGASATrERGKGFDSigdk--kLDIvtKQtAqFDRAKaLtvTeNILQaH


116493878Lactobacillus_casei_ATCC_334KdAKIaELQGiPGASATrERGKGFDgaAKg--kLDIvSKQtAgFDRAKGLtvTeNILQgn


191637143Lactobacillus_casei_BL23KdAKIaELQGiPGASATrERGKGFDgaAKg--kLDIvSKQtAgFDRAKGLtvTeNILQgn


42519534Lactobacillus_johnsonii_NCC_533KsAnILvLQ-qPtAisvvERiKGFEdtiKsHpnfqIIdRinttgqsensypkvQryLsee


90961073Lactobacillus_salivarius_UCC118pqAKILvLr-hwnAlsvkERyrGFvSEiKdNpnyqItenletlgqtdvaLknvQeLLkvd


 


15673617Lactococcus_lactis_lactis_IL1403KD-VqAIFAQNDEMALGAAKAVqA--tGqKIAIFGIDGESEthDAI--KAGTMTATiAQQ


116512498Lactococcus_lactis_cremoris_SK11KD-gqAIFAQNDEMALGAAKAVqA--SGqKIAIFGIDGESEthDAI--KAGTMTATiAQQ


125623640Lactococcus_lactis_cremoris_MG1363KD-VqAIFAQNDEMALGsAKAVqA--SGqKIAIFGIDGESEthDAI--KAGTMTATiAQQ


58337747Lactobacillus_acidophilus_NCFMRn-IkgIFAQNDEeAvGAARAVKA--AnKKItIiGfDGalaclNlI--qkGqiTATVgQQ


116493878Lactobacillus_casei_ATCC_334gD-IvgIFsQNDEMALGAvQAVKA--AGKKItIvGfDGEADgikAv--KAGdMaATVAQk


191637143Lactobacillus_casei_BL23gD-IvgIFsQNDEMALGAvQAVKA--AGKKItIvGfDGEADgikAv--KAGdMaATVAQk


42519534Lactobacillus_johnsonii_NCC_533Kk-fdtImslNDktAvGAlaAinsINSnKeIAIYtIDGsenikkmIsnKnpnikATVAQs


90961073Lactobacillus_salivarius_UCC118pDkfdiImAmdDqsAvGAlaAmdALNlhnKImvYGIDGsTnmkhlll-snpnaqATVAQs


 


15673617Lactococcus_lactis_lactis_IL1403PaKIGEMALQAtYDYYQGKKiahmInSPIyLVdKDNVDQHqr-----


116512498Lactococcus_lactis_cremoris_SK11PaKIGEMALQAtYDYYQGKKidhiInSPIyLVdKDNVDEHKw-----


125623640Lactococcus_lactis_cremoris_MG1363PaKIGEMALQAtYDYYQGKKissvInSPIyLVdKDNVDEHKw-----


58337747Lactobacillus_acidophilus_NCFMwnKIGQqsvQmvYDYYQnKKVpKndkvPVkiITKkNVsEfKkqvydk


116493878Lactobacillus_casei_ATCC_334PeemGrLALQAAYDHFnGKtVkKnVeSPlsLVTtEdank--------


191637143Lactobacillus_casei_BL23PeemGrLALQAAYDHFdGKtVkKnVeSPlsLVTtEdank--------


42519534Lactobacillus_johnsonii_NCC_533PlqIGkVAvnvAYkllnhqKVkKeIilPVqLITskNIkDfnitgWQ-


90961073Lactobacillus_salivarius_UCC118PiKlGQksiQvcYklvkGKKVpKdVvvPVfLlTKkNInDydvsgWQ-






 



 
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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