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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG


LaCOG00416
Product for cluster hypothetical protein other product description for cluster
Functional class for cluster unknown Subcellular location for cluster
Domains for cluster Size of cluster 9


Proteins in cluster LaCOG00416
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG00416 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG00416
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
55820747Streptococcus_thermophilus_LMG_18311MSK---FLntliIGAAsgAAAAyffTtEKGkavKARidEeiasfKe----dpkaYqnqvv
55822639Streptococcus_thermophilus_CNRZ1066MSK---FLntliIGAAsgAAAAyffTtEKGkavKARidEeiasfKe----dpkaYqnqvv
116627555Streptococcus_thermophilus_LMD-9MSK---FLntliIGAAsgAAAAyffTtEKGkavKARidEeiasfKe----dpkaYqnqvv
15672603Lactococcus_lactis_lactis_IL1403MSKKtGFLvGALVGAA----AALfLaPkKGsELregAgkiyDDLKe----npqEtltgmr
116511414Lactococcus_lactis_cremoris_SK11MSKKtGFLvGALVGAA----AALfLaPkKGsELreEAgkiyDDLKe----npqEtltgmr
125623447Lactococcus_lactis_cremoris_MG1363MSKKtGFLvGALVGAA----AALfLaPkKGsELreEAgkiyDDLKe----npqEtltgmr
29376293Enterococcus_faecalis_V583MaKKGGFflGAvIGgtAaAvAALlLaPksGkELrddlsnqtDDLKn----KAqDYtdyAv
116493001Pediococcus_pentosaceus_ATCC_25745MSKss-FLlGviLGgAAatAAAIkLTdttpqqLKeaAiEkfDDfmesndfdtatlkdrAv
116490741Oenococcus_oeni_PSU-1MaK--GlvaGiLatAAAyv-AfkaLpqEKqDELikKAkDtgNkLKD----lgyDaayaga
116618811Leuconostoc_mesenteroides_ATCC_8293MSKtkvFiaGvLattAAyv-AykaLpkDKqDELsAKAhntgalLRD----KAyDaaynAa
170016769Leuconostoc_citreum_KM20MSKakvFLaGiLaGAAAiA-AfkaLpkDKqDELKeKAsEtgDkLRn----KAyDaayvAa
28378854Lactobacillus_plantarum_WCFS1MSKKG-FLlGvvLGgAAiAtAvMkmddDKkaELKAKAqQgiaDfKD----RAiDYafyAn
116333815Lactobacillus_brevis_ATCC_367MaKhk-lLaGlvLGgAAyA-AyhaLdlEqrEaLKdaArDryNaLKD----RAiDYafyAa
81428026Lactobacillus_sakei_23KMaKKG-FLfGvLVGgAAaigAtLlLTPktGkELqnKlvDlgEDaiD----RAqDYyylmn
116494350Lactobacillus_casei_ATCC_334MaKKGhFLlGfvfGAAsalAttylLTPQtsDELKrRvkhasEDLaD----RAvDYfdyAk
191637682Lactobacillus_casei_BL23MaKKGhFLlGfvfGAAsalAttylLTPQtsDELKrRvkhasEDLaD----RvvDYfdyAk
 
55820747Streptococcus_thermophilus_LMG_18311ekvsDYKElA---vDtFqDyKtKfEngDiTatDltKAVqEKT---------------aqV
55822639Streptococcus_thermophilus_CNRZ1066ekvsDYKElA---vDtFqDyKtKfEngDiTatDltKAVqEKT---------------aqV
116627555Streptococcus_thermophilus_LMD-9ekvsDYKElA---vDtFqDyKtKfEngDiTatDltKAVqEKT---------------aqV
15672603Lactococcus_lactis_lactis_IL1403DtAlDFsa------ekFNDIKEKfDsgEi-sADKaKefllskRDLImEkVDSgElsKDsV
116511414Lactococcus_lactis_cremoris_SK11DtAlDFsa------ekFNEIKEKfDsgEi-sADKaKdfllskRDLImEkVDSgElsKEtV
125623447Lactococcus_lactis_cremoris_MG1363DtAlDFsa------ekFNEIKEKfDsgEi-sADKaKdfliskRDLImEkVDSgElsKEtV
29376293Enterococcus_faecalis_V583qkgteltEiA---kqkagvLsDqasDlagsvkeKtKdslDKaQgvsgdmLDNfkKqtgdl
116493001Pediococcus_pentosaceus_ATCC_25745ssvdDlKQrg---melaNrannKfnp----------------------------------
116490741Oenococcus_oeni_PSU-1DlAgDlsEkA---knkvgEfdEqikDsk--yADtyqgVkDKaaDvIdqAspyvEKAKDka
116618811Leuconostoc_mesenteroides_ATCC_8293DvAaDvtEkA---kektaaLKtdsqEk---yADQidAatEKiKDLtdqAapyvdKAKDfV
170016769Leuconostoc_citreum_KM20DfAgDvtEmA---kDraSELKaKgqDk---ygeQidqaaEqvKnLtdqAapyvdKAKDla
28378854Lactobacillus_plantarum_WCFS1DaAeDFKaeA---gqqFeDtKrKvaD----fADQyqAakQeTg--------------Esf
116333815Lactobacillus_brevis_ATCC_367DaAdDFKEal---de---rLanKaDapaw-------------------------------
81428026Lactobacillus_sakei_23KetAaDlKgeAkfhmnrvHDyasdwqEnaldikeQaKA-----------------------
116494350Lactobacillus_casei_ATCC_334easaDwKQsA---tDfvDELKrKgDDaDg----------------------------ska
191637682Lactobacillus_casei_BL23easaDwKQsA---tDfvDELKrKgDDaDg----------------------------ska
 
55820747Streptococcus_thermophilus_LMG_18311aDFakEsfelIkektAqVtpeqanVkaetkai---vDD----------------------
55822639Streptococcus_thermophilus_CNRZ1066aDFakEsfelIkektAqVtpeqanVkaetkai---vDD----------------------
116627555Streptococcus_thermophilus_LMD-9aDFakEsfelIkektAqVtpeqanVkaetkai---vDD----------------------
15672603Lactococcus_lactis_lactis_IL1403vDFfndtkDavvekinSMkDsgeELfdenesd---IseeAAevvAKfrDA-----KDEVK
116511414Lactococcus_lactis_cremoris_SK11iDFfndtkDavvekinSMkEsgeELfdeDesd---LsDeAAevvAKfsDA-----KDEVK
125623447Lactococcus_lactis_cremoris_MG1363iDFfndtkDavvekinSMkEsgeELfdeDesd---LsDeAAevvAKfsDA-----KDEVK
29376293Enterococcus_faecalis_V583sDqfkKAaDdaqDhaedLgEiaeDaaeDiyid---vkDsAAaaKetvsag-----vDE--
116493001Pediococcus_pentosaceus_ATCC_25745-DleEmdeDlviDnmAeatpyEkpt-----------------------------------
116490741Oenococcus_oeni_PSU-1yDlvDKAspyvdkakdTIdDlrhrfskeDidl---eEDdAlk------------------
116618811Leuconostoc_mesenteroides_ATCC_8293tpYiEKtqDaLtDlrdkfaseDiELtqDDvdlEEALaDlAddenvKdaeA----------
170016769Leuconostoc_citreum_KM20atYvDKAqDsLhnlrdkfgneDiELtqDDltlEEALrDlsqeaEshvDDA----------
28378854Lactobacillus_plantarum_WCFS1gsslDQAtDsLrselAkVeDdEg----DDedi---viDggAayQkagEDe-----Ktsap
116333815Lactobacillus_brevis_ATCC_367-------hDaasDetAAdaDdDivLssDEata---taDa---------------------
81428026Lactobacillus_sakei_23K-qFdEKtaDlksqfgSSLepaaeDf---Ddiv---IEgksAfgQAKdEae----------
116494350Lactobacillus_casei_ATCC_334lanyDaAteqLrDqlnTatDvDssadfDDi-v---LDgksAfaQAKdDDeGSDTRtDEVp
191637682Lactobacillus_casei_BL23lanyDaAteqLrDqlnTatDtDssadfDDi-v---LDgksAfaQAKdDDeGSDTRtDEVp
 
55820747Streptococcus_thermophilus_LMG_18311ifIDiKDISEEvAe--------------------
55822639Streptococcus_thermophilus_CNRZ1066ifIDiKDISEEvAe--------------------
116627555Streptococcus_thermophilus_LMD-9ifIDiKDISEEvAesn------------------
15672603Lactococcus_lactis_lactis_IL1403edIDtEslAEEAkKiADKAKEltnfPDEKe----
116511414Lactococcus_lactis_cremoris_SK11edIDtQslAEEAkKiADEAKEltnfPDEK-----
125623447Lactococcus_lactis_cremoris_MG1363edIDtQslAEEAkKiADEAKEltnfPDEK-----
29376293Enterococcus_faecalis_V583akettKDVpEKAAeakEDvKDaakdvkkefKg--
116493001Pediococcus_pentosaceus_ATCC_25745evfmphkIqE------------------------
116490741Oenococcus_oeni_PSU-1ddLtkpDsdEKedK--------------------
116618811Leuconostoc_mesenteroides_ATCC_8293ssIkddDtSEttAKpea-----------------
170016769Leuconostoc_citreum_KM20vektaKkVdEtAkvatEKAtEikDdvqEKlKkDK
28378854Lactobacillus_plantarum_WCFS1vpesapakdatpAKsdDEsttdessPak------
116333815Lactobacillus_brevis_ATCC_367atpsadDVpEKpve--------------------
81428026Lactobacillus_sakei_23KekMtpdslgE------------------------
116494350Lactobacillus_casei_ATCC_334epVEpEaVApaStdtApassvalDePqasatNDK
191637682Lactobacillus_casei_BL23epVEpEaVApaStdtApassvapDePqasatNDK
 
Copyright © 2010 Miaomiao Zhou
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