LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

LACOG

LaCOG00356
Product for cluster	muramidase	other product description for cluster
Functional class for cluster	cell-wall turnover	Subcellular location for cluster	Secreted
Domains for cluster	LysM domain , SCP-like extracellular protein	Size of cluster	2

Proteins in cluster LaCOG00356
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color legend:

Corrected sequence

Pseudo gene

Domain structure of LaCOG00356 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment for LaCOG00356
Color legend:		Corrected sequence		Pseudo gene		Gene made from mutiple pseudogenes


116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	MgKffkktlLtTAAGAAAFVgGhAaASADTVeVqSGDTLskIAAANnTTVDALAKANGIs
116617452	Leuconostoc_mesenteroides_ATCC_8293	MkKstiaKsvvTAAGAfA-VAGaAqvSAnTVSVKaGDTLykIASANGTTVDALvKANnIs
170016589	Leuconostoc_citreum_KM20	MsnnikktlLATAAGvAAFVgGhAaASADTVSVKSGDTLtgIASeNnTTVDdLAKANnIN
170016591	Leuconostoc_citreum_KM20	MksstiiKs-AvAAGAfA-aAGvAtASAnsVTVKSGDTLnqIArANGTTVDALvKANGIN

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	NkdLIlAGssLEi-----------NAtqevsglSeDGtSYTVqsGDTLsKIAektGvDVs
116617452	Leuconostoc_mesenteroides_ATCC_8293	NaNLIFvGQQLQTasSSStttqSSSsesSttttSSsnGSYTVKsGDTLnKIAAaNGTtVA
170016589	Leuconostoc_citreum_KM20	dkNLIiAGQQLtv------------AaPAaksvSADGatYTVqAGDsLsKIAeqtGvNiA
170016591	Leuconostoc_citreum_KM20	NpNLIFvGQQLQTegTAS----AAqAkPAqapatAtnGaYTVKAGDTLyrIAAaNGTsVA

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	vLsslNslSNtdLvltGQeLSLKASttqatssaatTvTaasaqSssvdtsnLkYIAAADT
116617452	Leuconostoc_mesenteroides_ATCC_8293	nLvAtNNISNaNLItVGQtLkLsASStsssTttqsStTttQttSnntat-----------
170016589	Leuconostoc_citreum_KM20	TLaslNNlAsnNVvvVGQqLSLKA--APvATAPtvTaSeqaqqAaPAaP-kLsYIAAADT
170016591	Leuconostoc_citreum_KM20	TLvAaNNIqNlNfIsVGQvLNLsgnAAPvAaAPaakqvaaQpavtPAqP-----------

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	DsNnFMTLDEYNTYvANGGStssaATessassAsASsaTEdItyIAAaDSDNDGYMTmAE
116617452	Leuconostoc_mesenteroides_ATCC_8293	---------------AsnGSyTvkSgdtlnkiAaAN-gTtvanlvAAnNisNanviTvgq
170016589	Leuconostoc_citreum_KM20	NkDgFMSLEEYNTYkANGGdtTvtAStPaaqpAqAS-vpEnVqyIAAaDTNkDGFMsaAE
170016591	Leuconostoc_citreum_KM20	-----------------atSaakqvTqPevapAtvA-pTQtVapvqqttT----------

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	YnAYKANGGSTSsSAqaTTStasssastssassstsdnityvaaadtnndgymtmaeyna
116617452	Leuconostoc_mesenteroides_ATCC_8293	tlklsAssaSTSsSStaTTS----------------------------------------
170016589	Leuconostoc_citreum_KM20	YaAYEANGGSaaQqqapaap----------------------------------------
170016591	Leuconostoc_citreum_KM20	---------vTtQAAetTTA----------------------------------------

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	ykanggstSSaSsaSssTQtTTTnTtaTAtTtNvsTgSttADAtINAWNAKRAeLGLSPV
116617452	Leuconostoc_mesenteroides_ATCC_8293	-------qSSSStqSssTsnnTasTsnTsnTsNssstSttADAtINAWNAKRAtLGLSPi
170016589	Leuconostoc_citreum_KM20	----------StataqvTQvaTTqTvaTtQqAapAa-SSdvEtLVNAmNArRAaLGLAPV
170016591	Leuconostoc_citreum_KM20	----------ttqvtpvvaqTTTpavqpAQTAtpATpnSaiqtLlttlNAKRskLGLgPV

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	tIsAsLtsQAQSRAQsigtssnWfstHmSSgTaEVVAnGFGaGSSVINAWYyETGMV--N
116617452	Leuconostoc_mesenteroides_ATCC_8293	kIsAsLtAQAQSRAQalatssnWfglHeSSsTpEVVAnGFaaGATVINAWYyETGMV--N
170016589	Leuconostoc_citreum_KM20	rlDAGLSArAQgRAQdAaANGGiptnHfStN-gEVVAdGFstG-SVIdAWYNETnMmTpN
170016591	Leuconostoc_citreum_KM20	slDAGLSArAaARAanAvANGGlpvnHfrtN-gEVVAiGwGyG-dVvNAWYNETnMVT-N

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	G--GHtaFIvNPnfTqAGvGyynGwIVinAqxmaittvglllthnnmqndylklaldnlg
116617452	Leuconostoc_mesenteroides_ATCC_8293	G--GHteFIvNssfTeAGvGyydGwIViDAh-----------------------------
170016589	Leuconostoc_citreum_KM20	GqPGHRmwvANsRAsavGFGIVGGvIVgEsD-----------------------------
170016591	Leuconostoc_citreum_KM20	GtPGHRmwvANPRATsvGFGIVGdtIVaEsD-----------------------------

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	ktfndynsGrFvaqqlmraqvplpegshwdaspahlikqmhhllgvlqatpgdllfwgtq
116617452	Leuconostoc_mesenteroides_ATCC_8293	------------------------------------------------------------
170016589	Leuconostoc_citreum_KM20	-------AGQF-------------------------------------------------
170016591	Leuconostoc_citreum_KM20	-------AGQy-------------------------------------------------

116617450_116617451	Leuconostoc_mesenteroides_ATCC_8293	napyevgiyvggnhfiavnngdhvakiqtlsrnwypciagsif
116617452	Leuconostoc_mesenteroides_ATCC_8293	-------------------------------------------
170016589	Leuconostoc_citreum_KM20	-------------------------------------------
170016591	Leuconostoc_citreum_KM20	-------------------------------------------