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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
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LACOG


LaCOG00059
Product for cluster polysaccharide deacetylase other product description for cluster intercellular adhesion protein
Functional class for cluster enzyme Subcellular location for cluster N-terminally anchored
Domains for cluster Polysaccharide deacetylase Size of cluster 12


Proteins in cluster LaCOG00059
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG00059 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG00059
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
15672664Lactococcus_lactis_lactis_IL1403----------------------------------------------mrstrEtkKyvkdg
116511479Lactococcus_lactis_cremoris_SK11MyafntydsisVysnkggleadeiqeknvILLvmflIIGFLvIm----strEteeyvkES
125623509Lactococcus_lactis_cremoris_MG1363---------------------------------------------MtlRfkdniKyvkES
55820551Streptococcus_thermophilus_LMG_18311-----------------m--------kLllLVLnLVLLGlLAVfMLn-RPNQStnnqQQn
55822442Streptococcus_thermophilus_CNRZ1066-----------------m--------kLllLVLnLVLLGlLAVfMLn-RPNQStsnkQQn
116627359Streptococcus_thermophilus_LMD-9-----------------m--------kLllLVLnLVLLGlLAVfMLn-RPNQStsnkQQn
15672087Lactococcus_lactis_lactis_IL1403MKKRaQrNKKRIRWasvl--------tVFVLLIgIIaIaFagVhLLSpKtNtSpKssQtS
116510924Lactococcus_lactis_cremoris_SK11MKKRvQsNKKRIRWasvl--------tVFVLLIgIIaIaFaAVhLLSpKaNtSqKssQtS
125622991Lactococcus_lactis_cremoris_MG1363MKKRvQrNKKRIRWasvl--------tVFVLLIgIIaIaFaAVhLLSpKvNtSqKssQtS
90962700Lactobacillus_salivarius_UCC118--------------mkkl--------fLiVftaffVVLsFLnIpvvSassshhrKaht--
28378963Lactobacillus_plantarum_WCFS1-------------mhmrg--------inFVLgLgVaLgllagcqaaSpatkQassqssKt
116332946Lactobacillus_brevis_ATCC_367--------mQKkfgylgg--------cLvliIaiIVgVGlrqrsthqvtPatahRpvtQt
 
15672664Lactococcus_lactis_lactis_IL1403KKEQPdfayES-----------llkDndgIivLcYHRVLKDTvVTNfAysIshnSqlhey
116511479Lactococcus_lactis_cremoris_SK11KKEQPdfayES-----------llqDndgIivLcYHRVLKDTpiTSfAstIsQnSqlhey
125623509Lactococcus_lactis_cremoris_MG1363KKEQPdfayES-----------llqDndgIivLcYHRVLKDTpiTSfAstIsQnSqlhey
55820551Streptococcus_thermophilus_LMG_18311qtsQsKSTA----------KWkTydDPvQIPILMYH------aVhvmd---PsetsNaNL
55822442Streptococcus_thermophilus_CNRZ1066qtsQsKSTA----------KWkTydDPvQIPILMYH------aVhvmd---PseasNaNL
116627359Streptococcus_thermophilus_LMD-9qtsQsKSTA----------KWkTydDPvQIPILMYH------aVhvmd---PseasNaNL
15672087Lactococcus_lactis_lactis_IL1403sQEkaKSTAsSSASQPKETKWlagTnenQlPILMfH------yVTSrADQlPQDSNNiNI
116510924Lactococcus_lactis_cremoris_SK11RQEktKSTvpSSsSQPKETKWlTgTnenQlPILMfH------yVTSrADQlPQDSNNiNI
125622991Lactococcus_lactis_cremoris_MG1363RQEktKSTvpSSsSQPKETKWlTgTnenQlPILMfH------yVTSrADQlPQDSNNiNI
90962700Lactobacillus_salivarius_UCC118-------------------hWkkvTaPvsfPILMYH------siTNip--------gnsL
28378963Lactobacillus_plantarum_WCFS1saksvhSsAKhqAqarpyqhWhTvkD-vhlPILMYH------sisS----------gnqL
116332946Lactobacillus_brevis_ATCC_367shvktthvAttk-------pWiklkrPlQlPILMYH------sisS----------gnNL
 
15672664Lactococcus_lactis_lactis_IL1403nVflqDFEqQMtfLKknhikvLTssEliekLnkKEV-ig---KaVviTFDDiDKslpenA
116511479Lactococcus_lactis_cremoris_SK11nVflEDFEkQMefLKEnhisvLTsEqliskinkKEV-ig---KaVviTFDDiDKsltenA
125623509Lactococcus_lactis_cremoris_MG1363nVflEDFEkQMefLKEnhisvLTsEqliskinkKEV-ig---KaVviTFDDiDKslpenA
55820551Streptococcus_thermophilus_LMG_18311iVapDnFEaQiKAmvDaGYyfLTPEEtyKafsenvLPaK---KVVWLTFDDGNEDfYTiA
55822442Streptococcus_thermophilus_CNRZ1066iVapDnFEaQiKAmvDaGYyfLTPEEtyKafsenvLPaK---KVVWLTFDDGNEDfYTiA
116627359Streptococcus_thermophilus_LMD-9iVapDnFEaQiKAmvDaGYyfLTPEEAyKafsenvLPaK---KVVWLTFDDGNEDfYTiA
15672087Lactococcus_lactis_lactis_IL1403vt----FEnelKALKEkGYtTvsgsdAeKiLTTKEkPsd---KmVWLTFDDGsvtmYTei
116510924Lactococcus_lactis_cremoris_SK11vt----FEnelKALKsqGYtTvsgtdAqKiLTTKEkPsd---KmVWLTFDDGsvtmYTdi
125622991Lactococcus_lactis_cremoris_MG1363vt----FEnelKALKsqGYtivsgtdAqKiLTTKEkPsd---KmVWLTFDDGsvtmYTdi
90962700Lactobacillus_salivarius_UCC118clppEqFEhQMelLhkeGYyTLTPgEAyRvLTrqEVPvgkenKIVfiTFDDGyKnnYssA
28378963Lactobacillus_plantarum_WCFS1rVpakEFqteMtyLKahGYrTLTanEAvyaLkhRrIPqK---KIVWiTlDDsyKDnmTaA
116332946Lactobacillus_brevis_ATCC_367rVpkqqFvqeltyLKqhhYrTLTatEAiRaLkTntIPqK---KVVWLTlDDayKDn-Tki
 
15672664Lactococcus_lactis_lactis_IL1403YPImKKlDLpfTqFIITGkVgqtidGSQmstWKeIKkMnenpLVtsGlHTndLHYQENfe
116511479Lactococcus_lactis_cremoris_SK11YPVmKeFDLpfTqFIITGkVgqtidGSQmsSWKeIKEMdenpLVisGlHTndLHYQENLe
125623509Lactococcus_lactis_cremoris_MG1363YPVmKeFDLpfTqFIITGkVgqtidGSQmsSWKeIKEMdenpLVisGlHTndLHYQENLe
55820551Streptococcus_thermophilus_LMG_18311YPILKKYkakATNnIITGFVkKgnvG--nLtvKQmKEMiAhGm-sFqSHTVn-------H
55822442Streptococcus_thermophilus_CNRZ1066YPILKKYkakATNnIITGFVkKgnvG--nLtvKQmKEMmAhGm-sFqSHTVn-------H
116627359Streptococcus_thermophilus_LMD-9YPILKKYkakATNnVITGFVkKgnvG--nLtvKQmKEMmAhGm-sFqSHTVn-------H
15672087Lactococcus_lactis_lactis_IL1403fPlLKKYNMHATNFIITGYVNKgqgG--iLtWeQIKEMkASGLVDFGSHTVS-------H
116510924Lactococcus_lactis_cremoris_SK11fPlLKKYNMHATNFIITGFVNKaqgG--iLSWeQIKEMkASGLVDFGSHTVS-------H
125622991Lactococcus_lactis_cremoris_MG1363fPlLKKYNMHATNFIITGFVNKaqgG--iLSWeQIKEMkASGLVDFGSHTVS-------H
90962700Lactobacillus_salivarius_UCC118YPILKKFsLHATigmITdkINtpd----mLStneLKklrkekLVsivSHTVS-------H
28378963Lactobacillus_plantarum_WCFS1wPILKqthqHATinfITGFtHKkn----hLtladaKrMqASGniDFqSHTVr-------H
116332946Lactobacillus_brevis_ATCC_367matLKKdhfHATinVITsFtHKtn----hLSlaQLKqMkAtGLVDFGSHTVh-------H
 
15672664Lactococcus_lactis_lactis_IL1403PiLSTNIsKkvvqkdyqkSQkafDEKLdQKgkVfAYPyGaqNkDledymlqdGiqgifTL
116511479Lactococcus_lactis_cremoris_SK11PvLSTNIsKkvvqkdylkSQktfqEeLNkKgNVfAYPyGaqNkDlenymlKdGisgifTL
125623509Lactococcus_lactis_cremoris_MG1363PvLSTNIsKkvvqkdylkSQktfqEeLNkKgNVfAYPyGaqNkDlenymlKdGisgifTL
55820551Streptococcus_thermophilus_LMG_18311PDLSv-tdKAtQKdELtNSidfLeDKLNtKvNtIAYPSGRYNQtTldLAkKt-YKlGLTt
55822442Streptococcus_thermophilus_CNRZ1066PDLSv-tdKAtQKdELtNSidfLeDKLNtKvNtIAYPSGRYNQtTlgLAkKt-YKlGLTt
116627359Streptococcus_thermophilus_LMD-9PDLSv-tdKAtQKdELtNSidfLeDKLNtKvNtIAYPSGRYNQtTlgLAkKt-YKlGLTt
15672087Lactococcus_lactis_lactis_IL1403PDLgk-LTleaQRtELeqSKadLDknLeQKTdIIcYPAGgYNQNTlnLAnelGYKfGL-L
116510924Lactococcus_lactis_cremoris_SK11PDLgT-qTledQRpELeqSKadLDknLNQqTNmIcYPAGgYNQNTlsLStelGYKfGL-L
125622991Lactococcus_lactis_cremoris_MG1363PDLgT-qTleaQRtELeqSKadLDknLNQqTNmIcYPAGgYNQNTlsLStelGYKfGL-L
90962700Lactobacillus_salivarius_UCC118tELnT-LnteqQlvEMaNSRglLnrsLkQnTilliYPvGRYtpaspfIAqRaGYKfaLTt
28378963Lactobacillus_plantarum_WCFS1lDLnn-LTyqvQltELssSKkwLDhnLqQnTqVIcYPAGRaNQqTikadkqaGYqyaLst
116332946Lactobacillus_brevis_ATCC_367lDLna-LTtAqQRtEIiNSKswLDqhLhQtTtllcYPAGRaNaaThkLAkpaGYqlaLTt
 
15672664Lactococcus_lactis_lactis_IL1403sPG-------vvtnetlysNiPRLiVTkdnwktikhwLl------segtq
116511479Lactococcus_lactis_cremoris_SK11sPG-------vvtnetkysNiPRLiVTkenwktiehwLV---------kK
125623509Lactococcus_lactis_cremoris_MG1363sPG-------vvtnetkyssiPRLiVTkenwktiehwLV---------kK
55820551Streptococcus_thermophilus_LMG_18311NeG-------LASanDGLlsLnRVRIlPTTTaKgllskI------ttDNK
55822442Streptococcus_thermophilus_CNRZ1066NeG-------LASanDGLlsLnRVRIlPTTTaKgllskI------ttDNK
116627359Streptococcus_thermophilus_LMD-9NeG-------LASanDGLisLnRVRIlPTTTaKgllskI------ttDNK
15672087Lactococcus_lactis_lactis_IL1403DPGRNGAiAiaAkeSDGLltLPRfRmmsSTTtEqmlQMIQPsTDYNekNK
116510924Lactococcus_lactis_cremoris_SK11DPGRNGvVAqaAkeSDGLltLPRfRmmsSTTaEemmQMIQPATDYNekNK
125622991Lactococcus_lactis_cremoris_MG1363DPGRNGAVAqaAkeSDGLltLPRfRmmsSTTaEemmQMIQPATDYNekNK
90962700Lactobacillus_salivarius_UCC118khG-------LAnaSqGLyeLhRqRViPNmsdEsfnQLl------sgN--
28378963Lactobacillus_plantarum_WCFS1aPG-------IAtstqnpyNLtRqRVvPgmsltafqtLl------tsNN-
116332946Lactobacillus_brevis_ATCC_367qeG-------LASlhEGryNLsRLRVTPgistatfatLI------Nvhhs
 
Copyright © 2010 Miaomiao Zhou
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