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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
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LACOG


LaCOG00012
Product for cluster beta-lactamase class A other product description for cluster
Functional class for cluster cell-wall turnover Subcellular location for cluster N-terminally anchored
Domains for cluster Size of cluster 6


Proteins in cluster LaCOG00012
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color legend: Corrected sequence Pseudo gene


Domain structure of LaCOG00012 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment for LaCOG00012
Color legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
55820112Streptococcus_thermophilus_LMG_18311---------mKKLlIAAtAvLVssspvF--llpmEKELTlTpKQVQn----LSqntIASl
55822002Streptococcus_thermophilus_CNRZ1066---------mKKLlIAAtAvLVssspvF--llpmEKELTlTpKQVQn----LSqntIASl
116626983Streptococcus_thermophilus_LMD-9---------mKKLlIAAtAvLVssspIF--llpmEKELTlTpKQVQn----LSqntIASl
15672000Lactococcus_lactis_lactis_IL1403MLGKVLIMQKqrtKInsGvALVMLLMIitGFFAFsqtryFaDKKVsKsKNIvAADKvtdK
116510858Lactococcus_lactis_cremoris_SK11MLGKVLIMQKqrIKInsGvALVMLLMIiPGFFAFpqsryFaDKaVsKPKNIvvADKvteK
125622899Lactococcus_lactis_cremoris_MG1363-------MQKqrIKInsGvALVMLLMIiPGFFAFpqsryFsDKaVsKPKNIvvADKvteK
 
55820112Streptococcus_thermophilus_LMG_18311s----QFKQIPKNprtItNIlTYknKELTEFKtsIKADTKLsISAIFwnAKGEPVFqLqD
55822002Streptococcus_thermophilus_CNRZ1066s----QFKQIPKNprtItNIlTYknKELTEFKtsIKADTKLsISAIFwnAKGEPVFqLqD
116626983Streptococcus_thermophilus_LMD-9s----QFKQIPKNprtItNIlTYknKELTEFKtsIKADTKLsISAIFwnAKGEPVFqLqD
15672000Lactococcus_lactis_lactis_IL1403EketetwtsIPqrAvAyQeltTYEDsnLTksvGKIpAkTqLDIpeIvGKs-----FKLKt
116510858Lactococcus_lactis_cremoris_SK11E----twdsIPprAvALQdlelYEDeqLTksvGKlsAkTqLDISeIaGKA-----FKLKD
125622899Lactococcus_lactis_cremoris_MG1363E----twdsIPprAvALQdIelYEDeqLTksvGKlsAkTqLDISeIaGKA-----FKLKD
 
55820112Streptococcus_thermophilus_LMG_18311GDFvAAsqKlIIDDsvyNQkPVDMTFWTKDGLtVyKDPyvLGtEKADSKLAsFkPIkvsr
55822002Streptococcus_thermophilus_CNRZ1066GDFvAAsqKlIIDDsvyNQkPVDMTFWTKDGLtVyKDPyvLGtEKADSKLAsFkPIkvsr
116626983Streptococcus_thermophilus_LMD-9GDFvAAsqKlIIDDsvyNQkPVDMTFWTKDGLtVyKDPyvLGtEKADSKLAsFkPIkvsr
15672000Lactococcus_lactis_lactis_IL1403GkyIStDKKavIsDlTIsrEsIntTiyTdksvNVFynPVTtyDnqimtnLSGtHqlsADK
116510858Lactococcus_lactis_cremoris_SK11GkyIldDKKnIIsDvTIsrEntnrTiyTnksvNVFynPVTtyDnqvmtRLnGtHqIlADK
125622899Lactococcus_lactis_cremoris_MG1363GkyIlADKKnIIsDvTIsrEntnrTiyTnksvNVFynPVTtyDnqvmttLnGtHqIlADK
 
55820112Streptococcus_thermophilus_LMG_18311AAqTHAGTYY---LADGE-GWINASDlSttDNrIEDVQRvLNEKYNnqEHISvYVKqLDt
55822002Streptococcus_thermophilus_CNRZ1066AAqTHAGTYY---LADGE-GWINASDlSttDNrIEDVQRvLNEKYNnqEHISvYVKqLDt
116626983Streptococcus_thermophilus_LMD-9AAqTHAGTYY---LADGE-GWINASDlSttDNrIEDVQRvLNEKYNnqEHISvYVKqLDt
15672000Lactococcus_lactis_lactis_IL1403mAKTnwGTYYEvSLdnGqKGWvsenDISLEnpKIkqVQaLLNqKYNDKky-SIYVKELDD
116510858Lactococcus_lactis_cremoris_SK11iAKTnwGTYYEISLesGqKGWvsedDISLEnpKIqqVQtLLNkKYNDKky-SIYVKELnD
125622899Lactococcus_lactis_cremoris_MG1363tAKTnwGTYYEISLesGqKGWvsedDISLEnpKIqqVQtLLNkKYNDKky-SIYVKELnD
 
55820112Streptococcus_thermophilus_LMG_18311DrvAAINDEKSMYAASIAKlGvLYyAQERLsqkKlSLsnEyqYTstvNGFPGAYDPDGSG
55822002Streptococcus_thermophilus_CNRZ1066DrvAAINDEKSMYAASIAKlGvLYyAQERLsqkKlSLsnEyqYTstvNGFPGAYDPDGSG
116626983Streptococcus_thermophilus_LMD-9DrvAAINDEKSMYAASIAKlGvLYyAQERLsqkKlSLsnEyqYTstvNGFPGAYDPDGSG
15672000Lactococcus_lactis_lactis_IL1403kFTAgvNqEqkMYsASlsKIpILYWtQkRLNEGlASLDDkLLYTPAINtFyGsYkPeGtG
116510858Lactococcus_lactis_cremoris_SK11kFTAgvNqnqeMYsASlsKIpILYWtQkRLNEGlASLDDkLLYTPAINtFyGsYkPeGtG
125622899Lactococcus_lactis_cremoris_MG1363kFTAgvNqnqeMYsASlsKIpILYWtQkRLNEGlASLDDkLLYTPAINtFyGsYkPeGtG
 
55820112Streptococcus_thermophilus_LMG_18311KIsKMtDDKNYSLEnLlKAvAqnSDNVAtNILgYYvANqyDNsFQKsvDKAsAtsWNMDk
55822002Streptococcus_thermophilus_CNRZ1066KIsKMtDDKNYSLEnLlKAvAqnSDNVAtNILgYYvANqyDNsFQKsvDKAsAtsWNMDk
116626983Streptococcus_thermophilus_LMD-9KIsKMtDDKNYSLEnLlKAvAqnSDNVAtNILgYYvANqyDNsFQKsvDKAsAtsWNMDk
15672000Lactococcus_lactis_lactis_IL1403nlPKtADnKyYSLqDvInrTAKlSDNVgSNmLAYYEtqEFnpNyQKEInriAgQEWNpkE
116510858Lactococcus_lactis_cremoris_SK11nlPKtADnKyYSLqDiInrTAKlSDNVgSNmLAYYEtqEFnpNyQKEInKiAgQEWNpkE
125622899Lactococcus_lactis_cremoris_MG1363nlPKtADnKyYSLqDiInrTAKlSDNVgSNmLAYYEtqEFnpNyQKEInKiAgQEWNpkE
 
55820112Streptococcus_thermophilus_LMG_18311KEltArAAGTLmEAIYrqnGdIiNyLssTDyDgErISkNI--DVPVAHKIGDAyDfKHDv
55822002Streptococcus_thermophilus_CNRZ1066KEltArAAGTLmEAIYrqnGdIiNyLssTDyDgErISkNI--DVPVAHKIGDAyDfKHDv
116626983Streptococcus_thermophilus_LMD-9KEltArAAGTLmEAIYrqnGdIiNyLssTDyDgErISkNI--DVPVAHKIGDAyDfKHDv
15672000Lactococcus_lactis_lactis_IL1403rnASAQmvGrmLEAlYNEGGAsFNALFDTsFDDvKIrAgvPKnisVAHKIGgADtDnHDA
116510858Lactococcus_lactis_cremoris_SK11rnASAQmvGkmLEAlYNEGGAsFNALFDTDFDDvKIkAaIPKnVPVAHKIGgADtDnHDA
125622899Lactococcus_lactis_cremoris_MG1363rnASAQmvGkmLEAlYNEGGAsFNALFDTDFDDvKIkAaIPKnVPVAHKIGgADtDnHDA
 
55820112Streptococcus_thermophilus_LMG_18311AIVyTDSPFILSIfTDkEGyDkItSIADDVYGILK
55822002Streptococcus_thermophilus_CNRZ1066AIVyTDSPFILSIfTDkEGyDkItSIADDVYGILK
116626983Streptococcus_thermophilus_LMD-9AIVyTDSPFILSIfTDkEGyDkItSIADDVYGILK
15672000Lactococcus_lactis_lactis_IL1403AIVFaskPylLvIETDGatDDEIKaIsqDVYGvmK
116510858Lactococcus_lactis_cremoris_SK11AIiFTsePylLvIETnGgsDDEIKnIsqDVYGvmK
125622899Lactococcus_lactis_cremoris_MG1363AIiFTsePylLvIETnGgsDDEIKnIsqDVYGvmK
 
Copyright © 2010 Miaomiao Zhou
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