LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Protein

GI:999990005
NCBI info	999990005	Gene:		Synonym:	LBUL_0198
SCL:	@Secretory(released) (with CS)	Length	162	COG
Species:	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	Location		Strand:
Product:
Sequence:	MRFNKILTAAAVASLGLTFVFSQGKAAEASINSEAKTKTYSGTKSLETLLKAAGLTYNQFNSVANGNKYGSRFGYRNGVGKPEGVVVHETATPGATAWDE GRYFNNNWMTAYTYVHAVVDNNQTIQLMSPDYGVWGAGPIANVRYIQVELCEVSTRSQFV

This pseudogene can be concatenated as : 999990005_116513407

Concatenated Sequence:

MRFNKILTAAAVASLGLTFVFSQGKAAEASINSEAKTKTYSGTKSLETLLKAAGLTYNQFNSVANGNKYGSRFGYRNGVGKPEGVVVHETATPGATAWDE
GRYFNNNWMTAYTYVHAVVDNNQTIQLMSPDYGVWGAGPIANVRYIQVELCEVSTRSQFVxMANDAYYIASLLHSYNLTPSRASQDGSGTIWSHNEVSHY
LGGTDHGDPDGYFAKWGYSMSDFYSLISYFYNKQGASTGTNTGSTNTGSGSNTGNTNTGSNTSSSTASSSQAPATQPVTTKKLRLMWNAYSYDASGKKLA
VKALKAGQYLKVYGSAVTIGSSKYYKYADGKYVKAGNIDGTSRTLTGNAWTYTISGSREWSTTKLLKGSKVTTYGSQVKIKGKAYYMTGFTSNNVAKYVK
AVNFQPKPVEVSTSKRLMRNSYSYSAAGKKLPDSMLKAGQYLKVYGSAVTIRKAKYYKYANGKYVNAGNIDGTSRPLKHNAYVYTVKGTRNWNEAKRLKG
TAVVTYGSRVKLSGKYYYMVGFSGQTALYIKAGNF

This is a corrected sequence

Protein clustering result of GI: 999990005

protein GI: 999990005 is in cluster LaCOG02219
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color Legend:

Corrected sequence

Pseudo gene

Protein Domain structure of LaCOG02219 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment of LaCOG02219

Color Legend:

Corrected sequence

Pseudo gene

Gene made from mutiple pseudogenes


29375862	Enterococcus_faecalis_V583	----mfKKlmIqLalvIgLSltipmta---------------------------------
29376053	Enterococcus_faecalis_V583	--mkKfsKfLLsLVvvtgLllptaa-----------------------------------
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	---MrfnKiLta--AAVaslgLtfvfsqgKaAeaSINse---------------------
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	---MrfnKiLta--AAVaslgLtfvfsqgKaAeaSINse---------------------
58336522	Lactobacillus_acidophilus_NCFM	---MKlRKkLItLIAAIsLtgVatntgvnivqAdSINvq---------------------
161506778	Lactobacillus_helveticus_DPC_4571	---MKlKKiLatLIAvLgLitVanvqsen-vhAeSINtl---------------------
116490259	Oenococcus_oeni_PSU-1	---MKgmKfLfcLLtAI---latfffingKakAdtpNNS---------------------
148544619	Lactobacillus_reuteri_F275_JGI	MAKrKkKqnLIyLsliIiVAaIiggswfyshhtreVsNSYAVSETATLSSSARIYNSLSA
184153977	Lactobacillus_reuteri_F275_Kitasato	MAKrKkKqnLIyLsliIiVAaIiggswfyshhtreVsNSYAVSETATLSSSARIYNSLSA
116334096	Lactobacillus_brevis_ATCC_367	--mkKwQrwaVrgIAit--AgcfglfwsntsAS---aNS---------------------
116334448	Lactobacillus_brevis_ATCC_367	-----mhKivLttLAtLgaAgIfglststttASaa-tsk---------------------

29375862	Enterococcus_faecalis_V583	-----------------------caytieadpInf-tY----------------------
29376053	Enterococcus_faecalis_V583	-----------------------dayqveqdpIdfggY----------------------
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	--------------aKtktYSG-tksletllKavGltY---------------------N
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	--------------aKtktYSG-tksletllKaaGltY---------------------N
58336522	Lactobacillus_acidophilus_NCFM	--------------aKkYqYSG-vtylYkmlKLeGikY---------------------N
161506778	Lactobacillus_helveticus_DPC_4571	--------------aQkYkYSd-vtylYkmlKLeGikY---------------------N
116490259	Oenococcus_oeni_PSU-1	--------------vlrYirdGvknkgWk--paaeqnwlsks-----------------t
148544619	Lactobacillus_reuteri_F275_JGI	IQRVNLPDQALVKVnRyYltSndnddtYAqinynGknYFvRATDIELKMNNEINSYLTQs
184153977	Lactobacillus_reuteri_F275_Kitasato	IQRVNLPDQALVKVnRyYltSndnddtYAqinynGknYFvRATDIELKMNNEINSYLTQs
116334096	Lactobacillus_brevis_ATCC_367	--------------intYi----anqnYAtpKItssiw---------------------s
116334448	Lactobacillus_brevis_ATCC_367	--------------vnsYi----ssknitpaKItksiw---------------------N

29375862	Enterococcus_faecalis_V583	-FPGsA-------------------snEliVlHEsgNernLGpHsLdnEvaYMKrNWsNA
29376053	Enterococcus_faecalis_V583	-FPGyA-------------------tnEliVlHEsgNgnnVGlNsLdnEtaYMKrNWtSA
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	qFnsvAnGnKygSrF---GYRNGvGKPEGVVVHETAtPGa----TawDEgrYfnNNWmaA
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	qFnsvAnGnKygSrF---GYRNGvGKPEGVVVHETAtPGa----TawDEgrYfnNNWmtA
58336522	Lactobacillus_acidophilus_NCFM	kFPGve-------------YKtG--KPEGiVIHETddPGa----TahDEaiYfnreWpkv
161506778	Lactobacillus_helveticus_DPC_4571	kFPGve-------------YeNG--KPEGiVVHETddPGa----TahDEaiYfnreWmNi
116490259	Oenococcus_oeni_PSU-1	mlPknn-------------YRyGkaRPEGiVIHETANPrS----TItsEitYMykNWrtA
148544619	Lactobacillus_reuteri_F275_JGI	glPhakitKqIlSiFEQRGYstssGnPrGVVIHdTgNenS----TIssEvsYMKqNysSt
184153977	Lactobacillus_reuteri_F275_Kitasato	glPhakitKqIlSiFEQRGYstssGnPrGVVIHdTgNenS----TIssEvsYMKqNysSt
116334096	Lactobacillus_brevis_ATCC_367	tFPknS-------------YRyn--KPEGVVVHETANPnS----TIynEiaYMKNNysaA
116334448	Lactobacillus_brevis_ATCC_367	gFPkyk-------------YRHGkGKPEGVVVHETANPsS----TIynEiaYMKNNyqNA

29375862	Enterococcus_faecalis_V583	--YVsyFVGsGgrVkQlApagqiqyGAGslANqKAyaQIELartNnaAtFkKD------Y
29376053	Enterococcus_faecalis_V583	--YVsyFVGsGgrVkQlApvgqiqWGAGatANaKAyaQIELartNnKetFkKD------Y
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	ytYVHavV-DnNQtIQlmSpDYgvWGAGPiANvR-yIQVELCEVsTRSqFvQsvaNdAYY
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	ytYVHavV-DnNQtIQlmSpDYgvWGAGPiANvR-yIQVELCEVsTRSqFvx-MaNdAYY
58336522	Lactobacillus_acidophilus_NCFM	kAYVHaFV-DdDhVIQmrSpEmgtWGAGPnANdR-FIQIELCEeNTRdAFiKsInNdAiY
161506778	Lactobacillus_helveticus_DPC_4571	nAYVHaFV-DskQIIQmrSpDmgtWGAGskANnR-FIQIELCEeNsRdAFAKsvnNdAiY
116490259	Oenococcus_oeni_PSU-1	--fVHnFV-DGNsLIgVAdTDYqcWGAGaiANpR-FIQIEqvEVhsKdeFAREqlNAAkf
148544619	Lactobacillus_reuteri_F275_JGI	rvfVHtFi-DnqQIInIAdTkYmaeGAGPyANpy-FVQfEMpheyTaASFAnQLgNAAYY
184153977	Lactobacillus_reuteri_F275_Kitasato	rvfVHtFi-DnqQIInIAdTkYmaeGAGPyANpy-FVQfEMpheyTaASFAnQLgNAAYY
116334096	Lactobacillus_brevis_ATCC_367	--fVHtFV-DaShIInIANTkYlsWGAGPvANaR-yVQfEqvEVhsKAAFAsELnNAAYY
116334448	Lactobacillus_brevis_ATCC_367	--fVHsFV-DGSrIInIANTDYlaWGvGspgNsR-FVQfEqvEVhsKSAFAhEvaNAAWY

29375862	Enterococcus_faecalis_V583	aAYvnlardLaqNigAdFsLDDGtGYgIvtHDwitKnwwG-DHtDPyGYlA----RW---
29376053	Enterococcus_faecalis_V583	aAYvnlirdLatqigAtFdLDDGtGYgIvtHDwitKnwwG-DHtDPyGYlA----qW---
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	iAsLLHsYNLtPsrAs----qDGsG-TIWSHNeVShYLGGTDHgDPdGYFA----KW---
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	iAsLLHsYNLtPsrAs----qDGsG-TIWSHNeVShYLGGTDHgDPdGYFA----KW---
58336522	Lactobacillus_acidophilus_NCFM	vAkLLHrYdLKPDnAc----DDGeG-TIWSHhaVStYLGGTDHvDPdGYFe----KW---
161506778	Lactobacillus_helveticus_DPC_4571	iAkLLHrYdLKPDnAc----DDGeG-TIWSHhaVStYLGGTDHvDPdGYFA----KW---
116490259	Oenococcus_oeni_PSU-1	aAdqLNhYhL----gA----asqrk-TIWtHDdVSKYLGGsnHtDPinYwnnSAKdWFsg
148544619	Lactobacillus_reuteri_F275_JGI	TAYILkqnNLpvtkgt----kDGgG-TvWtHamiSnYLGGTDHeDPisYwSTAARKlFGT
184153977	Lactobacillus_reuteri_F275_Kitasato	TAYILkqnNLpvtkgt----kDGgG-TvWtHamiSnYLGGTDHeDPisYwSTAARKlFGT
116334096	Lactobacillus_brevis_ATCC_367	TAYILkqngLtPkryt----------TvlSHhdVSnrLGGTnHtDPdGYwkSnAstyFGT
116334448	Lactobacillus_brevis_ATCC_367	TAYLLkeYNLKPNdAA----yDGkG-svWSHgsVashLGGstHtDPvGYYSatgKKyFGq

29375862	Enterococcus_faecalis_V583	GiSkAqlaqdlQtgvsetGeTviiqPGK------PNapKyqvGqaiRftSiyptpdalIn
29376053	Enterococcus_faecalis_V583	GiSkAqlaqdlQtglpedGSevivNPGK------PNkpKykvGqhvRftTiyKnpdapIs
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	GYSMSDFYSLIsyFYNkqGASTgTNtGsTNTGSGsNTGntNTGSntsssTassgqaPAtQ
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	GYSMSDFYSLIsyFYNkqGASTgTNtGsTNTGSGsNTGntNTGSntsssTasssqaPAtQ
58336522	Lactobacillus_acidophilus_NCFM	GYSMdqFFdLIQyYYdlq--------------------akdTdAkeKdPaksKkdveAIQ
161506778	Lactobacillus_helveticus_DPC_4571	GYdMdqFYSLIEyYYNlq--------------------KkNehThtKdPnktKeevPAVQ
116490259	Oenococcus_oeni_PSU-1	iYtinDFiwLVnqikNnt------------------------------------------
148544619	Lactobacillus_reuteri_F275_JGI	tYninnFveLVQaYYNqm------------------------------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	tYninnFveLVQaYYNqm------------------------------------------
116334096	Lactobacillus_brevis_ATCC_367	tYtMtDFvSLVntqYakl----------------------sgsStstddpadnntdtStd
116334448	Lactobacillus_brevis_ATCC_367	GYtMAmFYqMVkkYYNgf----------------------sTshtk--------------

29375862	Enterococcus_faecalis_V583	ehlsAE--alWtqvgtitaklpdrqnLyrvensghllGYvndgdiaelWr---PQtkKsf
29376053	Enterococcus_faecalis_V583	qhinAn--tlWtqvgtitQkingrknLyriensgkllGYandgdiaelWenSKPtpaKtf
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	pvTTkKlRLmWnAYsYdAsGkKlAvKalKagqYlkVyGsavtigssKYYKyadgKyvKAg
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	pvTTkKlRLmWnAYsYdAsGkKlAvKalKagqYlkVyGsavtigssKYYKyadgKyvKAg
58336522	Lactobacillus_acidophilus_NCFM	gavT----LghdAYiYdAKGkn-tkKLkKaggpvvVmGYk-amnnkKYYqigKnQyvvAs
161506778	Lactobacillus_helveticus_DPC_4571	gavT----LghdAYiYteKGkK-tktLkKagspvvVmGYk-tinkkKYYKigKdQyvdAs
116490259	Oenococcus_oeni_PSU-1	--------------------------LtK-------------------------------
148544619	Lactobacillus_reuteri_F275_JGI	------------------------------------------------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	------------------------------------------------------------
116334096	Lactobacillus_brevis_ATCC_367	htTpttkktvtynhgsnnEtatlAnnytnwtvYnhVkGts-gaykigwgrlSadhkgakv
116334448	Lactobacillus_brevis_ATCC_367	--------LvnatYtsvnKqaKlSsKyksyylYnhVkGsnknatkqswsKiS-PKvgKty

29375862	Enterococcus_faecalis_V583	lI-------gvDeGivlRAGqpsllapiYgiwpKntrFyydtfyiaDgYvfIGgTdt---
29376053	Enterococcus_faecalis_V583	tI-------gvNeGivlRTGspslyapvYgvwpKgaqFrydsvrvaDgYvwLGgsds---
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	NIDgTsRTltgNAwTyTiSGsrEwsTTKllkGSKvtTYgSqVnikGkaYYmtGfTSNNVA
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	NIDgTsRTltgNAwTyTiSGsrEwsTTKllkGSKvtTYgSqVkikGkaYYmtGfTSNNVA
58336522	Lactobacillus_acidophilus_NCFM	NIDaTdRvvkkNtylrTnTGriE-penKvkkGSrvLTYgSrVtikGqkYYaL--------
161506778	Lactobacillus_helveticus_DPC_4571	NIDaTvRTvknetylhTRSGrvE-kqnKvkeGSrvLTYgSkItikGqkYYaL--------
116490259	Oenococcus_oeni_PSU-1	------------------------------------------------------------
148544619	Lactobacillus_reuteri_F275_JGI	------------------------------------------------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	------------------------------------------------------------
116334096	Lactobacillus_brevis_ATCC_367	yvDsrgvkkggwSGTwyRirfsknaTTKYwvySKvLnFpkvtysdasgtmtLnnsqNyam
116334448	Lactobacillus_brevis_ATCC_367	yIDmTaKkstgS--mwyRirpsknsTkRYwvySgnLTsikdVatttatatsasveSs---

29375862	Enterococcus_faecalis_V583	---------------------tgaRiyLpigpNdgNaqnTWgsfas--------------
29376053	Enterococcus_faecalis_V583	---------------------NgTRicIpvgpNdgNpdnTWgtgY---------------
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	KYvKAsNFQvKtVEttTtKrlmrnsYsySaagkKlpDsMlkagqYLKvYGsaVTIRKAKY
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	KYvKAvNFQpKpVEvsTsKrlmrnsYsySaagkKlpDsMlkagqYLKvYGsaVTIRKAKY
58336522	Lactobacillus_acidophilus_NCFM	---------------------NATQFiLAsdie---------------------------
161506778	Lactobacillus_helveticus_DPC_4571	---------------------NATQYiLAkdie---------------------------
116490259	Oenococcus_oeni_PSU-1	------------------------------------------------------------
148544619	Lactobacillus_reuteri_F275_JGI	------------------------------------------------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	------------------------------------------------------------
116334096	Lactobacillus_brevis_ATCC_367	ynhvlnstylskttahTqdfstgTKvtVNkqgNKaSDgsTWyrivLnnkaywikaaglnt
116334448	Lactobacillus_brevis_ATCC_367	---------------------NAsaassSvassssSN-----------------------

29375862	Enterococcus_faecalis_V583	------------------------------------------------------------
29376053	Enterococcus_faecalis_V583	------------------------------------------------------------
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	YKYANGKYVNAGNIDGTSRPLKHNAYVYTVKGTRNWSEAKRLKGStVtTYGSRVKLAGKY
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	YKYANGKYVNAGNIDGTSRPLKHNAYVYTVKGTRNWNEAKRLKGTaVvTYGSRVKLSGKY
58336522	Lactobacillus_acidophilus_NCFM	------------------------------------------------------------
161506778	Lactobacillus_helveticus_DPC_4571	------------------------------------------------------------
116490259	Oenococcus_oeni_PSU-1	------------------------------------------------------------
148544619	Lactobacillus_reuteri_F275_JGI	------------------------------------------------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	------------------------------------------------------------
116334096	Lactobacillus_brevis_ATCC_367	na----------------------------------------------------------
116334448	Lactobacillus_brevis_ATCC_367	------------------------------------------------------------

29375862	Enterococcus_faecalis_V583	-------------------
29376053	Enterococcus_faecalis_V583	-------------------
104773421	Lactobacillus_delbrueckii_bulgaricus_ATCC11842	YYMVGFSGQTALYIKAGNF
999990005_116513407	Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	YYMVGFSGQTALYIKAGNF
58336522	Lactobacillus_acidophilus_NCFM	-------------------
161506778	Lactobacillus_helveticus_DPC_4571	-------------------
116490259	Oenococcus_oeni_PSU-1	-------------------
148544619	Lactobacillus_reuteri_F275_JGI	-------------------
184153977	Lactobacillus_reuteri_F275_Kitasato	-------------------
116334096	Lactobacillus_brevis_ATCC_367	-------------------
116334448	Lactobacillus_brevis_ATCC_367	-------------------