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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein

GI:90962560
NCBI info 90962560 Gene: - Synonym: LSL_1591
SCL: @Secretory(released) (with CS) Length 228 COG -
Species: Lactobacillus_salivarius_UCC118 Location 1671456..1672142 Strand: +
Product: hypothetical protein
Sequence: 
MLILVLLLGLAGAFLHMNTYQPTSSAKQASQHATVTKNVTTFKAKNSKLTLVFYPGGLVEPDSYATWAYQVSKEGYTVKIVHFPLNLAVLAPNQVKQVVG
PHEKFVIGGHSLGGAMAARYAAKADKPNLKGLFLLAAYTDQKGRLDHSQLPVLSVTASKDGVLNWTNYHANKKYLSKDTTFSTISGGNHGGFGSYGHQKG
DKIAKISNAKQQKQVAQILIKWLKTIKN


This is a pseudogene


Protein clustering result of GI: 90962560
protein GI: 90962560 is in cluster LaCOG02567
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG02567 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG02567
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


116514570Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365meiwkrnKkKrRnRkSKrKKnkmakkqkgLLalAviLAaLLLaFglyF--gNyYHAdkta


15673278Lactococcus_lactis_lactis_IL1403------MeNEvRmkkSKlKK---------ILGFSgvviLiiatFiffyLKtNsYHp---T


90962560Lactobacillus_salivarius_UCC118----------------------------------mlilVLLLGlagaFLhmNtYqp---T


29374914Enterococcus_faecalis_V583------MKNrtksRwkKi-----------VLGiglFLAVLvIGlti-FiKnstYqA---T


 


116514570Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365qqAMKsSrtvkVkqtaegylfdGtaKKnAIIFYPGAkVEttaYApllkQIAsqeaDVFLV


15673278Lactococcus_lactis_lactis_IL1403SeALKiSQkAeVqndtl-vF-KGnpKKtsIIFYqGALVDnkSYsiWAnklAKaGYtVYLi


90962560Lactobacillus_salivarius_UCC118SSAkqaSQhATVtKNvt-tF-KaknsKltlvFYPGgLVEpdSYAtWAyQVsKeGYtVkiV


29374914Enterococcus_faecalis_V583dSALKiSQsATqeKNyd-yYtnGqkndtAlIFYPGALVapaSYseWAqEVAtkGYDVYvV


 


116514570Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365amPLhmAfFglNKADkIrasYhyQNwymsGHSLGaAMAAmySAdhlkD--yrGLimLAgY


15673278Lactococcus_lactis_lactis_IL1403kePLNLAVFnPdKAssIiktNkinNYVVGGHSLGGvitsRFAeKrisDssLKGvFFLASY


90962560Lactobacillus_salivarius_UCC118hfPLNLAVlaPNQvkQvvg--phEkFVIGGHSLGGAMAARyAAK-adkpnLKGLFlLAAY


29374914Enterococcus_faecalis_V583hfPLNLAVlaPNaAEQIikdHpqQNFVLaGHSLGGvMAsRFvAe--nEqrIKGMiYLASY


 


116514570Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365PtKd--LhaaNfsVLSIygSKDG--NakmlQKntQYLPnDyTkqvIkGGNHAqFGNYGlQ


15673278Lactococcus_lactis_lactis_IL1403PDKKGsLtnfNggiLSIvgSqDGVLNWSSYQKAKQYLtqqTkYiTIEGGNHSGFGsYGfQ


90962560Lactobacillus_salivarius_UCC118tDqKGrLdhsqlpVLSvtASKDGVLNWTNYhanKkYLsKDTTFsTIsGGNHgGFGsYGhQ


29374914Enterococcus_faecalis_V583PDeKGaLnkkNlpVLSItAtnDGVLNWTSYQKAKQfLPKDTqYvSIEGGNHAGFGNYGvQ


 


116514570Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365KGDgqATISrkaQQqAtaQavrqyLlahdk-


15673278Lactococcus_lactis_lactis_IL1403KGDkkASISNlQQQeAIfQtLknWLirld--


90962560Lactobacillus_salivarius_UCC118KGDkiAkISNaKQQkqVaQiLikWLktikN-


29374914Enterococcus_faecalis_V583KGDskATISNeQQQteIsQlivaWLqsrpNk






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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