spacer
spacer

LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Logo
spacer
Menu
Home
Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
Show all LaCOGs
Search / Browse All
Domain Search
Blast your sequence
spacer
Protein

GI:125623926
NCBI info 125623926 Gene: - Synonym: llmg_1095
SCL: @Intracellular Length 247 COG -
Species: Lactococcus_lactis_cremoris_MG1363 Location 1054301..1055044 Strand: +
Product: hypothetical protein
Sequence: 
MEVSAATVGNTSSGANVAFQPKKTPTNPVSPGDGKTPITPTTPGVPNTSTPVASDDGLTLDYVPTLNFGTHYVDASSPHTWSAWAANDGSGKAIPQFMQV
TDNRGTATGPTGWSVSLTQTAQFKGTKAGDLTNAVLTFNTDKTNNVVSTSTSKASSTVNTATNPLTPGTAVNIFQADAGTGTGTNLLSFGAADGSSLVTD
PESLDASTNTTGKVDPNITLSVPAGSAKVDTYTTTLNWNLYSAPGNA


This is a pseudogene


Protein clustering result of GI: 125623926
protein GI: 125623926 is in cluster LaCOG02581
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG02581 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG02581
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


15673337Lactococcus_lactis_lactis_IL1403MKKTILSLSGVAVITatLLSTSVLEVSAAsVGsTtSGANVAFQPKKTPTNPVSPGDGKTP


116512205Lactococcus_lactis_cremoris_SK11MKKTIISLSGIAVIStaLLATNLLEVSAATVGNTSSGANVAFQPKKTPTNPVSPGDGKTP


125623926Lactococcus_lactis_cremoris_MG1363-----------------------mEVSAATVGNTSSGANVAFQPKKTPTNPVSPGDGKTP


 


15673337Lactococcus_lactis_lactis_IL1403IsPTTPGVPNTSnPVASDDGLTLDYVPaiNFGTHYVDAStaHTWSAWAANDGSGKAIPQF


116512205Lactococcus_lactis_cremoris_SK11ITPTTPGVPNTSTPVASDDGLTLDYVPTLNFGTHYVDASSPHTWSAWAANDGSGKAIPQF


125623926Lactococcus_lactis_cremoris_MG1363ITPTTPGVPNTSTPVASDDGLTLDYVPTLNFGTHYVDASSPHTWSAWAANDGSGKAIPQF


 


15673337Lactococcus_lactis_lactis_IL1403lQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLvNAVmTFNnDKTNtVVSTSmnKASST


116512205Lactococcus_lactis_cremoris_SK11MQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLTNAVLTFNTDKTNNVVSTSTSKASST


125623926Lactococcus_lactis_cremoris_MG1363MQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLTNAVLTFNTDKTNNVVSTSTSKASST


 


15673337Lactococcus_lactis_lactis_IL1403VNTATNaLvPGTAVNIFQADAGTGTGTNLLSFGAgDGStLVTDPEtLDsaTNTTGKVDPN


116512205Lactococcus_lactis_cremoris_SK11VNTATNPLTPGTAVNIFQeDAGTGTGTNLLSFGAADGSSLVTDsESLDASTNTTGKVDPN


125623926Lactococcus_lactis_cremoris_MG1363VNTATNPLTPGTAVNIFQADAGTGTGTNLLSFGAADGSSLVTDPESLDASTNTTGKVDPN


 


15673337Lactococcus_lactis_lactis_IL1403ITLnVPAGSAKVDTYTTTLNWNLYSAPGNA


116512205Lactococcus_lactis_cremoris_SK11ITLSVPAGSAKVDTYTTTLNWNLYSAPGNA


125623926Lactococcus_lactis_cremoris_MG1363ITLSVPAGSAKVDTYTTTLNWNLYSAPGNA






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
		Copyright © 2010 Miaomiao Zhou
		 
		 
	
 
	
 
			 
	 
	spacer