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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:125623560
NCBI info 125623560 Gene: - Synonym: llmg_0704
SCL: @Intracellular Length 67 COG -
Species: Lactococcus_lactis_cremoris_MG1363 Location 693318..693521 Strand: +
Product: hypothetical protein
Sequence:
MNVEFQGGGYWTNTSHLTYIQNTGSGVLYYDRVNHKYVFSQTRGAMGAAIYVFNAQGVNWYRGVLYV


This is a pseudogene


Protein clustering result of GI: 125623560
protein GI: 125623560 is in cluster LaCOG99184
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG99184 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG99184
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
116512530Lactococcus_lactis_cremoris_SK11mkpkqiyvilialavfsefysisvsadsvvsnsqdvttplrilprMNMEFEGGssdsGYW
125623560Lactococcus_lactis_cremoris_MG1363---------------------------------------------MNVEFQGG----GYW
 
116512530Lactococcus_lactis_cremoris_SK11TNTSNLTFIQNTaSGVLYYDQVNHKYVFAQTRGpMGAAIYVFNAQGVNW-------
125623560Lactococcus_lactis_cremoris_MG1363TNTSHLTYIQNTgSGVLYYDRVNHKYVFSQTRGaMGAAIYVFNAQGVNWyrgvlyv
 
Copyright © 2010 Miaomiao Zhou
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