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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein

GI:116628650
NCBI info 116628650 Gene: - Synonym: STER_1968
SCL: @Intracellular Length 251 COG -
Species: Streptococcus_thermophilus_LMD-9 Location 1818918..1819673 Strand: +
Product: hypothetical protein
Sequence: 
MKT*KKIVHEVSLISLFLGGGLATWVYSQGGLTDLQNQNKSELDYVKKEVDNFNKIDIKSSSYNVLIQSSEVNKATLSYYQKIKNTIDTTVKDGQLTIND
NNSKLDLTSKKHINFFELKDLISLSSAIDQEVRKQTIIITLPKKQTIDFLKVDLATGNLDLSHSTVRQVDINLNMGNLNFNKMIVSNLKANLDVGSVDSD
NTLFTNADLSIAMGEYSGNNLIFNGHNKLDVTTGEVEIALKDYTINVQADSHSGEVDVTNNLKNSKDNTLTITSDLGNITVE


This is a pseudogene


This is a corrected sequence


Protein clustering result of GI: 116628650
protein GI: 116628650 is in cluster LaCOG03364
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG03364 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG03364
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


55821959Streptococcus_thermophilus_LMG_18311MKTWKKIVHEVSLISLFLGGGLATWVYSQGGLTDLQNQNKSELDYVKKEVDNFNKIDIKS


55823877Streptococcus_thermophilus_CNRZ1066MKTWKKIVHEVSLISLFLGGGLATWVYSQGGLTDLQNQNKSELDYVKKEVDNFNKIDIKS


116628650Streptococcus_thermophilus_LMD-9MKT-KKIVHEVSLISLFLGGGLATWVYSQGGLTDLQNQNKSELDYVKKEVDNFNKIDIKS


 


55821959Streptococcus_thermophilus_LMG_18311iSYNVLIQSSEVNKATLSYYQKIKNTIDTTVKDGQLTINDNNSKLDLTSKKHINFFELKD


55823877Streptococcus_thermophilus_CNRZ1066iSYNVLIQSSEVNKATLSYYQKIKNTIDTTVKDGQLTINDNNSKLDLTSKKHINFFELKD


116628650Streptococcus_thermophilus_LMD-9sSYNVLIQSSEVNKATLSYYQKIKNTIDTTVKDGQLTINDNNSKLDLTSKKHINFFELKD


 


55821959Streptococcus_thermophilus_LMG_18311LISLSSAIDQEVRKQTIIITLPKKQTIDFLKVDLATGNLDLSHSTVRQVDINLNMGNLNF


55823877Streptococcus_thermophilus_CNRZ1066LISLSSAIDQEVRKQTIIITLPKKQTIDFLKVDLATGNLDLSHSTVRQVDINLNMGNLNF


116628650Streptococcus_thermophilus_LMD-9LISLSSAIDQEVRKQTIIITLPKKQTIDFLKVDLATGNLDLSHSTVRQVDINLNMGNLNF


 


55821959Streptococcus_thermophilus_LMG_18311NKMIVSNLKANLDVGSVDSDNTLFTNADLSIAMGEYSGNNLIFNGHNKLDVTTGEVEIAL


55823877Streptococcus_thermophilus_CNRZ1066NKMIVSNLKANLDVGSVDSDNTLFTNADLSIAMGEYSGNNLIFNGHNKLDVTTGEVEIAL


116628650Streptococcus_thermophilus_LMD-9NKMIVSNLKANLDVGSVDSDNTLFTNADLSIAMGEYSGNNLIFNGHNKLDVTTGEVEIAL


 


55821959Streptococcus_thermophilus_LMG_18311KDYTINVQADSHSGEVDVTNNLKNSKDNTLTITSDLGNITVE


55823877Streptococcus_thermophilus_CNRZ1066KDYTINVQADSHSGEVDVTNNLKNSKDNTLTITSDLGNITVE


116628650Streptococcus_thermophilus_LMD-9KDYTINVQADSHSGEVDVTNNLKNSKDNTLTITSDLGNITVE






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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